RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SENP1Q9P0U3 644 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PPP4R1LQ9P1A2 415 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 XPR1Q9UBH6 696 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PCTPQ9UKL6 214 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 PROCRQ9UNN8 238 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF175Q9Y473 711 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 OR10H1Q9Y4A9 318 aa5.28□□□□□ -1.56
CSDE1-207ENST00000483407 GNG14A0A1W2PPG7 69 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 INAFM1C9JVW0 142 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ETV2O00321 342 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SCO2O43819 266 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ZIC3O60481 467 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 COQ9O75208 318 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 CNOT4O95628 575 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PLGP00747 810 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PDYNP01213 254 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 KRT6AP02538 564 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 KRT6BP04259 564 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 INHBAP08476 426 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 RPS17P08708 135 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 CT45A8P0DMV1 189 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 CT45A9P0DMV2 189 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 MED14OSP0DP75 135 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 HSD3B1P14060 373 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PPP3CBP16298 524 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 HK1P19367 917 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 FLNAP21333 2647 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 TBXA2RP21731 343 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 CCKARP32238 428 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 EVI2BP34910 448 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 MPIP34949 423 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 KRT6CP48668 564 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PTH2RP49190 550 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 CLK3P49761 638 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 NR1H2P55055 460 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 B3GALT5-AS1P59052 145 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 DUSP2Q05923 314 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 C2orf54Q08AI8 447 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF155Q12901 538 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 HEPACAMQ14CZ8 416 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PON3Q15166 354 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SGCBQ16585 318 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 CT45A2Q5DJT8 189 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF628Q5EBL2 1059 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 BEX5Q5H9J7 111 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 FAM180BQ6P0A1 224 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SLC44A2Q8IWA5 706 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 FAM9CQ8IZT9 166 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 C1orf52Q8N6N3 182 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 OR9A2Q8NGT5 310 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 FIG4Q92562 907 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 KAT2AQ92830 837 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 RAB24Q969Q5 203 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 EXOSC8Q96B26 276 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 EFHD2Q96C19 240 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SLC7A6OSQ96CW6 309 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 MTBPQ96DY7 904 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 APIPQ96GX9 242 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 VSTM2LQ96N03 204 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ZNF681Q96N22 645 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 VRK1Q99986 396 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SPATA25Q9BR10 227 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PIGQQ9BRB3 760 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PRRG4Q9BZD6 226 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 SHCBP1LQ9BZQ2 653 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 KLHL4Q9C0H6 718 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 OR10A2Q9H208 303 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 DSN1Q9H410 356 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 RNF122Q9H9V4 155 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ZMAT3Q9HA38 289 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 FOLH1BQ9HBA9 442 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 FARSBQ9NSD9 589 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 PNPOQ9NVS9 261 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 NTMQ9P121 344 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 HEY2Q9UBP5 337 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 VPS29Q9UBQ0 182 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 MRTO4Q9UKD2 239 aaKnown RBP5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ABCG2Q9UNQ0 655 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 EML6Q6ZMW3 1958 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 MPDZO75970 2070 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 NINQ8N4C6 2090 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
CSDE1-207ENST00000483407 ARHGAP21Q5T5U3 1957 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-207ENST00000483407 OR2M5A3KFT3 312 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 CCDC151A5D8V7 595 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 H3BUI4 141 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 PCDH7O60245 1069 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 PLOD3O60568 738 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 CGAP01215 116 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 IL3P08700 152 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 GYPEP15421 78 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 TSPAN8P19075 237 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 DDCP20711 480 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 MALP21145 153 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 HMOX2P30519 316 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 GSTM5P46439 218 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 SERPINB9P50453 376 aa5.26□□□□□ -1.57
CSDE1-207ENST00000483407 GAS1P54826 345 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms