RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 HTRA1Q92743 480 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 REXO5Q96IC2 774 aaKnown RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 CXorf36Q9H7Y0 433 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 YAE1D1Q9NRH1 226 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 GLRX2Q9NS18 164 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 ZCCHC3Q9NUD5 404 aaKnown RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 PAQR5Q9NXK6 330 aaPredicted RBP12.35□□□□□ -0.43
VARS-226ENST00000483275 NTMQ9P121 344 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 SNX8Q9Y5X2 465 aa12.35□□□□□ -0.43
VARS-226ENST00000483275 DPRXA6NFQ7 191 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 ESPNB1AK53 854 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 ZNF814B7Z6K7 855 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 ZNF195O14628 629 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 HMGN2P05204 90 aaKnown RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 IFI6P09912 130 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 FRKP42685 505 aaPredicted RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 TP53BP2Q13625 1128 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 EXOSC6Q5RKV6 272 aaKnown RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 PDSS1Q5T2R2 415 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 LIPMQ5VYY2 423 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 LRIG3Q6UXM1 1119 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 OLIG3Q7RTU3 272 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 C10orf107Q8IVU9 208 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 EIF1ADQ8N9N8 165 aaKnown RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 OR6Y1Q8NGX8 325 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 SPATA3Q8NHX4 192 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 AGR3Q8TD06 166 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 CCDC126Q96EE4 140 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 DNAJA3Q96EY1 480 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 FCRL1Q96LA6 429 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 ZNF300Q96RE9 604 aaPredicted RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 BTBD2Q9BX70 525 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 FANCFQ9NPI8 374 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 NPAP1Q9NZP6 1156 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 DCDC2Q9UHG0 476 aa12.34□□□□□ -0.43
VARS-226ENST00000483275 ING1Q9UK53 422 aaPredicted RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 WBP11Q9Y2W2 641 aaKnown RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 YLPM1P49750 1951 aaKnown RBP12.34□□□□□ -0.43
VARS-226ENST00000483275 SLC28A1O00337 649 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 AZIN1O14977 448 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 LSM1O15116 133 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 RGS14O43566 566 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 TP53P04637 393 aaPredicted RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 CHRNGP07510 517 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 BCKDHAP12694 445 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 CPA3P15088 417 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 PRKCAP17252 672 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 PRPH2P23942 346 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 ELK4P28324 431 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 ADH6P28332 368 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 CCR4P51679 360 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 C21orf58P58505 322 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 DNAJB13P59910 316 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 RPS26P62854 115 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 PCLAFQ15004 111 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 RNPS1Q15287 305 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 HEPHL1Q6MZM0 1159 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 HMBOX1Q6NT76 420 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 BHLHA15Q7RTS1 189 aaPredicted RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 MISPQ8IVT2 679 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 PHC2Q8IXK0 858 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 DDIASQ8IXT1 998 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 OR5AK3PQ8NH89 298 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 ZFP90Q8TF47 636 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 CPNE4Q96A23 557 aaPredicted RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 TRMT61AQ96FX7 289 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 C1orf50Q9BV19 199 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 POTEKPQ9BYX7 375 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 TXLNGYQ9BZA5 131 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 QRSL1Q9H0R6 528 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 OR10A4Q9H209 315 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 ESRP2Q9H6T0 727 aaKnown RBP12.33□□□□□ -0.44
VARS-226ENST00000483275 OXSMQ9NWU1 459 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 ICAM5Q9UMF0 924 aa12.33□□□□□ -0.44
VARS-226ENST00000483275 CENPVL1A0A0U1RR11 272 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 A0A1W2PQD3 144 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 GPRIN2O60269 458 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 TBX19O60806 448 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 SLU7O95391 586 aaKnown RBP12.32□□□□□ -0.44
VARS-226ENST00000483275 H6PDO95479 791 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 CD8AP01732 235 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 LAMP1P11279 417 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 ATP6V1C1P21283 382 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 IDUAP35475 653 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 SERPINB4P48594 390 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 CDH11P55287 796 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 DCST2Q5T1A1 773 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 KANK2Q63ZY3 851 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 CNPY4Q8N129 248 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 OR5D16Q8NGK9 328 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms