RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TMPRSS11AQ6ZMR5 421 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 OR52I1Q8NGK6 324 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 OR1L3Q8NH93 324 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 ZNF582Q96NG8 517 aaPredicted RBP13.36□□□□□ -0.27
CHD3-211ENST00000481999 PTCHD1Q96NR3 888 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 DUSP15Q9H1R2 295 aaPredicted RBP13.36□□□□□ -0.27
CHD3-211ENST00000481999 SNTG1Q9NSN8 517 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 ERVK13-1Q9NX77 482 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 TESQ9UGI8 421 aaKnown RBP13.36□□□□□ -0.27
CHD3-211ENST00000481999 A0A087WV62 115 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 IQCMA0A1B0GVH7 501 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 IRGMA1A4Y4 181 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 SNTNA6NMZ2 147 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 PATE3B3GLJ2 98 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 H3BMH7 237 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 MYL12AP19105 171 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 EFNB1P98172 346 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 CARTPTQ16568 116 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 MINDY4Q4G0A6 757 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 C3orf38Q5JPI3 329 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 EXOSC6Q5RKV6 272 aaKnown RBP13.36□□□□□ -0.27
CHD3-211ENST00000481999 LIPKQ5VXJ0 399 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 PRR23CQ6ZRP0 262 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 OR8H2Q8N162 312 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 ZNF619Q8N2I2 560 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 NR4A3Q92570 626 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 SLC41A3Q96GZ6 507 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 WDFY2Q96P53 400 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 FOLH1BQ9HBA9 442 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 C14orf119Q9NWQ9 140 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 CALML5Q9NZT1 146 aa13.36□□□□□ -0.27
CHD3-211ENST00000481999 SLC35F4A4IF30 521 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 WWP2O00308 870 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 IFNGR2P38484 337 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 CASP3P42574 277 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 PAQR6Q6TCH4 344 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 SLC36A4Q6YBV0 504 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 PFN4Q8NHR9 129 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 C16orf52Q8NHV5 167 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 GRHL3Q8TE85 626 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 TRMT61AQ96FX7 289 aaKnown RBP13.35□□□□□ -0.27
CHD3-211ENST00000481999 ZDHHC12Q96GR4 267 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 ZNF285Q96NJ3 590 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 ELF4Q99607 663 aaPredicted RBP13.35□□□□□ -0.27
CHD3-211ENST00000481999 ATP13A2Q9NQ11 1180 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 DUSP22Q9NRW4 184 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 CPED1A4D0V7 1026 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 SYT5O00445 386 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 AP3D1O14617 1153 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 BRINP1O60477 761 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 CPEP16870 476 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 POU6F2P78424 691 aaPredicted RBP13.35□□□□□ -0.27
CHD3-211ENST00000481999 LARS2Q15031 903 aaKnown RBP13.35□□□□□ -0.27
CHD3-211ENST00000481999 FLYWCH1Q4VC44 716 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 SLC30A6Q6NXT4 461 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 LAPTM4BQ86VI4 370 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 SDR16C5Q8N3Y7 309 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 ASB15Q8WXK1 588 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 CNOT9Q92600 299 aaKnown RBP13.35□□□□□ -0.27
CHD3-211ENST00000481999 FGF11Q92914 225 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 PCED1AQ9H1Q7 454 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 CUTCQ9NTM9 273 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 FLRT3Q9NZU0 649 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 V9GYH0 126 aa13.35□□□□□ -0.27
CHD3-211ENST00000481999 GNB5O14775 395 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 NUDT21O43809 227 aaKnown RBP13.34□□□□□ -0.27
CHD3-211ENST00000481999 GDF9O60383 454 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 CTNSO60931 367 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 IL1AP01583 271 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 ETV5P41161 510 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 OMPP47874 163 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 ETV1P50549 477 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 PSPHP78330 225 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 ZXDAP98168 799 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 RAB40BQ12829 278 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 WDR45BQ5MNZ6 344 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 AGAP6Q5VW22 663 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 GUSBP11Q6P575 273 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 UBALD2Q8IYN6 164 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 TEX47Q8TBZ9 253 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 TMEM163Q8TC26 289 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 SLC25A46Q96AG3 418 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 CCDC74AQ96AQ1 378 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 VSTM2LQ96N03 204 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 AGAP4Q96P64 663 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 ENKD1Q9H0I2 346 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 UCK1Q9HA47 277 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 PNO1Q9NRX1 252 aaKnown RBP13.34□□□□□ -0.27
CHD3-211ENST00000481999 MRPS18AQ9NVS2 196 aaKnown RBP13.34□□□□□ -0.27
CHD3-211ENST00000481999 KLHL28Q9NXS3 571 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 NPAP1Q9NZP6 1156 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 CDHR4A6H8M9 788 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 C17orf51A8MQB3 221 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 PRODHO43272 600 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 CT45A8P0DMV1 189 aa13.34□□□□□ -0.27
CHD3-211ENST00000481999 CT45A9P0DMV2 189 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms