RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 IL4I1Q96RQ9 567 aa4.41□□□□□ -1.7
COPA-203ENST00000481040 DPH7Q9BTV6 452 aa4.41□□□□□ -1.7
COPA-203ENST00000481040 GLIPR2Q9H4G4 154 aa4.41□□□□□ -1.7
COPA-203ENST00000481040 SUDS3Q9H7L9 328 aaPredicted RBP4.41□□□□□ -1.7
COPA-203ENST00000481040 MEPEQ9NQ76 525 aaPredicted RBP4.41□□□□□ -1.7
COPA-203ENST00000481040 PSMC3IPQ9P2W1 217 aaPredicted RBP4.41□□□□□ -1.7
COPA-203ENST00000481040 KCNG2Q9UJ96 466 aa4.41□□□□□ -1.7
COPA-203ENST00000481040 FER1L5A0AVI2 2057 aa4.41□□□□□ -1.7
COPA-203ENST00000481040 BCLAF3A2AJT9 711 aaKnown RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 SMCO3A2RU48 225 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 FRG2CA6NGY1 282 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 H3BMQ9 156 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 BMP15O95972 392 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 GAPDHP04406 335 aaKnown RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 S100A9P06702 114 aaKnown RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 WNT2P09544 360 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 SDC1P18827 310 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 CD1CP29017 333 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 GNA11P29992 359 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 CHRNB4P30926 498 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 TIMP3P35625 211 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 SLC11A1P49279 550 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 THBS3P49746 956 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 HLCSP50747 726 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 CLDN8P56748 225 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 ERVFC1-1P60608 527 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 RPL8P62917 257 aaKnown RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 PHEXP78562 749 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 DNAJC3Q13217 504 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 CHRNA6Q15825 494 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 NDUFA9Q16795 377 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 KLHL40Q2TBA0 621 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 KLHL38Q2WGJ6 581 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 TIGITQ495A1 244 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 ZNF672Q499Z4 452 aaPredicted RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 FAM76BQ5HYJ3 339 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 WLSQ5T9L3 541 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 FAM219BQ5XKK7 198 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 KIAA1161Q6NSJ0 714 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 KIR3DL3Q8N743 410 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 NUP37Q8NFH4 326 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 OR4D9Q8NGE8 314 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 ZNF519Q8TB69 540 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 MRGPRDQ8TDS7 321 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 SLC38A4Q969I6 547 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 GMPPAQ96IJ6 420 aaPredicted RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 OR5B2Q96R09 309 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 TGS1Q96RS0 853 aaKnown RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 FMO2Q99518 471 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 HIPK2Q9H2X6 1198 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 SP140LQ9H930 580 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 NT5MQ9NPB1 228 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 PDP1Q9P0J1 537 aaPredicted RBP4.4□□□□□ -1.71
COPA-203ENST00000481040 WDR81Q562E7 1941 aa4.4□□□□□ -1.71
COPA-203ENST00000481040 IGHV2-70DA0A0C4DH43 119 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 GOLGA8TH3BQL2 631 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 K7EQG2 157 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 M0QX08 132 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ACOT8O14734 319 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ATP5LO75964 103 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 AP2A1O95782 977 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 OTCP00480 354 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 HPP00738 406 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 IGHG1P01857 330 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 HSD17B1P14061 328 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 GNB3P16520 340 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 RDXP35241 583 aaKnown RBP4.39□□□□□ -1.71
COPA-203ENST00000481040 ATP5C1P36542 298 aaKnown RBP4.39□□□□□ -1.71
COPA-203ENST00000481040 RAB9AP51151 201 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 MFAP2P55001 183 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 DMRTC1Q5HYR2 192 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 FAM120AOSQ5T036 256 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 C1orf220Q5T0J3 134 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 TMEM220Q6QAJ8 160 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 TPRA1Q86W33 373 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ZNF491Q8N8L2 437 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 SUMF1Q8NBK3 374 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 C11orf45Q8TAV5 145 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 FAM110BQ8TC76 370 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 HCAR2Q8TDS4 363 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 IL1F10Q8WWZ1 152 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 UBE2E3Q969T4 207 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ATXN7L3BQ96GX2 97 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 HSD17B14Q9BPX1 270 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 DNTTIP1Q9H147 329 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 SLITRK2Q9H156 845 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 STMN4Q9H169 189 aaPredicted RBP4.39□□□□□ -1.71
COPA-203ENST00000481040 WDR13Q9H1Z4 485 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 RHBGQ9H310 441 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ANKRD19PQ9H560 264 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 MOB1AQ9H8S9 216 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 POPDC2Q9HBU9 364 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ZNF446Q9NWS9 450 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 ELOVL2Q9NXB9 296 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 RNF7Q9UBF6 113 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 PITPNC1Q9UKF7 332 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 CFAP45Q9UL16 551 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 RARRES3Q9UL19 164 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 VANGL2Q9ULK5 521 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 MGAT4AQ9UM21 535 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms