RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 VRK2Q86Y07 508 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 TMCO5AQ8N6Q1 288 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 GPR119Q8TDV5 335 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 SLC35B4Q969S0 331 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 PIGQQ9BRB3 760 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 ARMC7Q9H6L4 198 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 MED17Q9NVC6 651 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 CMTM6Q9NX76 183 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 NDE1Q9NXR1 346 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 DNAJB12Q9NXW2 375 aaKnown RBP17.89■□□□□ 0.45
LIME1-205ENST00000480139 ESPL1Q14674 2120 aa17.89■□□□□ 0.45
LIME1-205ENST00000480139 HEATR5AQ86XA9 2040 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 PRORSD1PA6NEY8 169 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 CLDN24A6NM45 220 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 ETV2O00321 342 aaPredicted RBP17.88■□□□□ 0.45
LIME1-205ENST00000480139 PRRG2O14669 202 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 GMFGO60234 142 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 BCAS1O75363 584 aaPredicted RBP17.88■□□□□ 0.45
LIME1-205ENST00000480139 SERPINB7O75635 380 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 LINGO3P0C6S8 592 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 PRKAR1BP31321 381 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 SLC6A8P48029 635 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 CPA2P48052 419 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 SLC7A2P52569 658 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 PSME3P61289 254 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 ZNF311Q5JNZ3 666 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 CCDC80Q76M96 950 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 PATL1Q86TB9 770 aaKnown RBP17.88■□□□□ 0.45
LIME1-205ENST00000480139 ZNF440Q8IYI8 595 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 GTPBP8Q8N3Z3 284 aaPredicted RBP17.88■□□□□ 0.45
LIME1-205ENST00000480139 BHLHE22Q8NFJ8 381 aaPredicted RBP17.88■□□□□ 0.45
LIME1-205ENST00000480139 SFXN2Q96NB2 322 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 UGT2B28Q9BY64 529 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 PRDM14Q9GZV8 571 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 SPAG4Q9NPE6 437 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 OSGIN2Q9Y236 505 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 VDAC3Q9Y277 283 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 SLC6A5Q9Y345 797 aa17.88■□□□□ 0.45
LIME1-205ENST00000480139 OR2M5A3KFT3 312 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 NPIPA2E9PIF3 369 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 NPIPA3F8WFD2 350 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 FAAHO00519 579 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 NME4O00746 187 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 NUDT14O95848 222 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 ESRRAP11474 423 aaPredicted RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 BMP7P18075 431 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 PGCP20142 388 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 ADH6P28332 368 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 EIF1P41567 113 aaKnown RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 CA7P43166 264 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 CASP6P55212 293 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 DLX5P56178 289 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 EIF2S3LQ2VIR3 472 aaKnown RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 SLC25A53Q5H9E4 307 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 WLSQ5T9L3 541 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 RAET1LQ5VY80 246 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 DHRS4L2Q6PKH6 230 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 TRPM8Q7Z2W7 1104 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 PGAM4Q8N0Y7 254 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 OR2T12Q8NG77 320 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 CNOT9Q92600 299 aaKnown RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 ABTB1Q969K4 478 aaPredicted RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 NSL1Q96IY1 281 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 TIMP4Q99727 224 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 KLHDC3Q9BQ90 382 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 RPH3AQ9Y2J0 694 aaPredicted RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 CHST2Q9Y4C5 530 aa17.87■□□□□ 0.45
LIME1-205ENST00000480139 HELZ2Q9BYK8 2649 aaKnown RBP17.87■□□□□ 0.45
LIME1-205ENST00000480139 CCT8L1PA6NM43 557 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 PYCARD-AS1I3L0S3 204 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 GCM2O75603 506 aaPredicted RBP17.86■□□□□ 0.45
LIME1-205ENST00000480139 CYP7B1O75881 506 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 MFN2O95140 757 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 TPOP07202 933 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 CPN1P15169 458 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 CALB2P22676 271 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 PSMA4P25789 261 aaKnown RBP17.86■□□□□ 0.45
LIME1-205ENST00000480139 CCR4P51679 360 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 EEFSECP57772 596 aaKnown RBP17.86■□□□□ 0.45
LIME1-205ENST00000480139 LIPEQ05469 1076 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 BCL2A1Q16548 175 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 ENPP6Q6UWR7 440 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 CD163Q86VB7 1156 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 PM20D2Q8IYS1 436 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 PRR7Q8TB68 274 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 ST8SIA1Q92185 356 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 RELTQ969Z4 430 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 MRGPRX4Q96LA9 322 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 ALG2Q9H553 416 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 PIF1Q9H611 641 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 EVA1AQ9H8M9 152 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 TMEM181Q9P2C4 612 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 ACAD8Q9UKU7 415 aa17.86■□□□□ 0.45
LIME1-205ENST00000480139 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 A0A1B0GUH1 482 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 ELOVL7A1L3X0 281 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 ZNHIT1O43257 154 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 WDR1O75083 606 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 NTN1O95631 604 aa17.85■□□□□ 0.45
LIME1-205ENST00000480139 PRKCAP17252 672 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms