RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 EDEM2Q9BV94 578 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 DDA1Q9BW61 102 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 SLC19A3Q9BZV2 496 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 FAM117AQ9C073 453 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 LAT2Q9GZY6 243 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 HHATLQ9HCP6 504 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 RASSF1Q9NS23 344 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 MED17Q9NVC6 651 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 IL20Q9NYY1 176 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 CNOT2Q9NZN8 540 aaKnown RBP10.13□□□□□ -0.79
VTI1A-204ENST00000480057 SELENONQ9NZV5 590 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 RPS6KB2Q9UBS0 482 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 PSORS1C1Q9UIG5 152 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 NTNG1Q9Y2I2 539 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 CDH10Q9Y6N8 788 aa10.13□□□□□ -0.79
VTI1A-204ENST00000480057 BDP1A6H8Y1 2624 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 A0A1W2PQ72 361 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 EFCAB10A6NFE3 127 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 CLCA1A8K7I4 914 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ALG1L2C9J202 215 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ZNF264O43296 627 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 RGS10O43665 173 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 FOXD2O60548 495 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 CNOT3O75175 753 aaKnown RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 REM1O75628 298 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 HTR1AP08908 422 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 PIPP12273 146 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 CCL4P13236 92 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 POU1F1P28069 291 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 PCYT1AP49585 367 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 SLC26A5P58743 744 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 COPZ1P61923 177 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 EFNB1P98172 346 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 SKP2Q13309 424 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 GINS1Q14691 196 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 NCF4Q15080 339 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 SLC27A4Q6P1M0 643 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 FAM198BQ6UWH4 519 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ZNF620Q6ZNG0 422 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 PTCHD4Q6ZW05 846 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 NUP54Q7Z3B4 507 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 MISPQ8IVT2 679 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 CCDC103Q8IW40 242 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 FAM26EQ8N5C1 309 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ZNF420Q8TAQ5 688 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 FCGR1BQ92637 280 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ATOH1Q92858 354 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 UBE2FQ969M7 185 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 OMA1Q96E52 524 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 FAM46AQ96IP4 442 aaKnown RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 SLC38A2Q96QD8 506 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 GPA33Q99795 319 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 PRRX2Q99811 253 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ULBP3Q9BZM4 244 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 PAK1IP1Q9NWT1 392 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-204ENST00000480057 FLRT3Q9NZU0 649 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 ICAM5Q9UMF0 924 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 LOXL2Q9Y4K0 774 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 PCDHGA3Q9Y5H0 932 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 CEPT1Q9Y6K0 416 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 SEC16AO15027 2179 aa10.12□□□□□ -0.79
VTI1A-204ENST00000480057 UNC119BA6NIH7 251 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 PTGES3LE9PB15 166 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 XPNPEP2O43895 674 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 PPM1BO75688 479 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 SEC14L2O76054 403 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ZFAND5O76080 213 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 RCBTB2O95199 551 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 SOX14O95416 240 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 PNMTP11086 282 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ZNF28P17035 718 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 PCMT1P22061 227 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ABCD3P28288 659 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 INSM1Q01101 510 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-204ENST00000480057 SF3A2Q15428 464 aaKnown RBP10.11□□□□□ -0.79
VTI1A-204ENST00000480057 EXT1Q16394 746 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 CSRP2Q16527 193 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ISXQ2M1V0 245 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ALG10BQ5I7T1 473 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 TMEM236Q5W0B7 351 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 XAF1Q6GPH4 301 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 WBP2NLQ6ICG8 309 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 LCN10Q6JVE6 187 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 WDR88Q6ZMY6 472 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 SHISA6Q6ZSJ9 500 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 KIF18BQ86Y91 864 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 NLGN4XQ8N0W4 816 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 CYP4Z2PQ8N1L4 340 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 SLC15A4Q8N697 577 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 OR13F1Q8NGS4 319 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 C9orf43Q8TAL5 461 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-204ENST00000480057 FGF11Q92914 225 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 MR1Q95460 341 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 MUL1Q969V5 352 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 LMF1Q96S06 567 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ADOQ96SZ5 270 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 COPS4Q9BT78 406 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 B3GNT4Q9C0J1 378 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ZNF700Q9H0M5 742 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms