RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 UQCC2Q9BRT2 126 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SLC25A23Q9BV35 468 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 GON7Q9BXV9 100 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 OR2B2Q9GZK3 357 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ADNPQ9H2P0 1102 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 GLIPR2Q9H4G4 154 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PRORYQ9H606 182 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 EPS8L2Q9H6S3 715 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CXorf21Q9HAI6 301 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SDR39U1Q9NRG7 319 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 DDX18Q9NVP1 670 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 GPR83Q9NYM4 423 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 TAS2R9Q9NYW1 312 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 NPAP1Q9NZP6 1156 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 CCDC167Q9P0B6 97 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 PTGFRNQ9P2B2 879 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 KCNN3Q9UGI6 736 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 SNX8Q9Y5X2 465 aa5.71□□□□□ -1.5
SF3B1-209ENST00000479532 COPG1Q9Y678 874 aaKnown RBP5.71□□□□□ -1.5
SF3B1-209ENST00000479532 ACACAQ13085 2346 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 A0A0A6YYJ9 748 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 PRSS51A0A1B0GVH4 220 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 C2orf92A0A1B0GVN3 265 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 WASHC1A8K0Z3 465 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 PLOD2O00469 737 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 NR5A2O00482 541 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ANGPT2O15123 496 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SLC22A2O15244 555 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 CLOCKO15516 846 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 EMC8O43402 210 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 DNAJB5O75953 348 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SOX30O94993 753 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 CPSF4O95639 269 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 C6orf47O95873 294 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ITGAMP11215 1152 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 LAMP1P11279 417 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 GPX3P22352 226 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 KRT20P35900 424 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 CHI3L1P36222 383 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 FRKP42685 505 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 PRIM2P49643 509 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ANXA11P50995 505 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 EFNA3P52797 238 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 NRG3P56975 720 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SOX8P57073 446 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 CD83Q01151 205 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 FUT7Q11130 342 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF155Q12901 538 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 CHAF1BQ13112 559 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SELPLGQ14242 412 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 LTB4RQ15722 352 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 KCNJ8Q15842 424 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 MAPKAPK3Q16644 382 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 TBR1Q16650 682 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF750Q32MQ0 723 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ZBED5Q49AG3 693 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 VPS26BQ4G0F5 336 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF628Q5EBL2 1059 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SPANXN4Q5MJ08 99 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 OR4F3Q6IEY1 312 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 FAM180BQ6P0A1 224 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 C19orf48Q6RUI8 117 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM107Q6UX40 140 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ISLR2Q6UXK2 745 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM64Q6YI46 380 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 HDDC2Q7Z4H3 204 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 TAGAPQ8N103 731 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 METTL25Q8N6Q8 603 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 HORMAD2Q8N7B1 307 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SIMC1Q8NDZ2 872 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 NFAM1Q8NET5 270 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 OR52R1Q8NGF1 315 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 OR56A1Q8NGH5 318 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 OR8K3Q8NH51 312 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SUN3Q8TAQ9 357 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 NUBPLQ8TB37 319 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SLC22A8Q8TCC7 542 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SFXN5Q8TD22 340 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 BRIX1Q8TDN6 353 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ELP5Q8TE02 316 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF721Q8TF20 911 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 S100ZQ8WXG8 99 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 KAT2AQ92830 837 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 EXTL1Q92935 676 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 MAGED4Q96JG8 741 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 PANX1Q96RD7 426 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 GAL3ST4Q96RP7 486 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 WDR77Q9BQA1 342 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 BDH2Q9BUT1 245 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 TRAF4Q9BUZ4 470 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 YTHDF1Q9BYJ9 559 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 SEMA4CQ9C0C4 833 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 WDR12Q9GZL7 423 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 MAT2BQ9NZL9 334 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 BTNL2Q9UIR0 455 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 LEF1Q9UJU2 399 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 MRTO4Q9UKD2 239 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 VPS4AQ9UN37 437 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 PPIEQ9UNP9 301 aaKnown RBP5.7□□□□□ -1.5
SF3B1-209ENST00000479532 EXO1Q9UQ84 846 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms