RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 EXOSC3Q9NQT5 275 aaKnown RBP22.67■■□□□ 1.22
PERM1-203ENST00000479361 MED17Q9NVC6 651 aa22.67■■□□□ 1.22
PERM1-203ENST00000479361 TNFRSF10DQ9UBN6 386 aa22.67■■□□□ 1.22
PERM1-203ENST00000479361 TINAGQ9UJW2 476 aa22.67■■□□□ 1.22
PERM1-203ENST00000479361 C7orf72A4D263 438 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 FIGNL2A6NMB9 653 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 ZNF17P17021 662 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 PLPPR5Q32ZL2 321 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 GXYLT1Q4G148 440 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 RELTQ969Z4 430 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 GPATCH1Q9BRR8 931 aaKnown RBP22.66■■□□□ 1.22
PERM1-203ENST00000479361 TP63Q9H3D4 680 aaPredicted RBP22.66■■□□□ 1.22
PERM1-203ENST00000479361 TAGLN3Q9UI15 199 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 SH3BGRL2Q9UJC5 107 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 SLC5A6Q9Y289 635 aa22.66■■□□□ 1.22
PERM1-203ENST00000479361 ZNF443Q9Y2A4 671 aaPredicted RBP22.66■■□□□ 1.22
PERM1-203ENST00000479361 DNAJC13O75165 2243 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 CLDN24A6NM45 220 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 PGCP20142 388 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 EIF1P41567 113 aaKnown RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 SLC6A8P48029 635 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 B3GALT5-AS1P59052 145 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 ZNF311Q5JNZ3 666 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 MRPL2Q5T653 305 aaKnown RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 INTS11Q5TA45 600 aaKnown RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 RNF220Q5VTB9 566 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 VRK2Q86Y07 508 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 ZZZ3Q8IYH5 903 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 ZNF440Q8IYI8 595 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 GTPBP8Q8N3Z3 284 aaPredicted RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 FITM2Q8N6M3 262 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 OR5M9Q8NGP3 310 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 GPR119Q8TDV5 335 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 REXO5Q96IC2 774 aaKnown RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 PNPLA3Q9NST1 481 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 STOML1Q9UBI4 398 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 GPC6Q9Y625 555 aaPredicted RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 RELNP78509 3460 aa22.65■■□□□ 1.22
PERM1-203ENST00000479361 HELZ2Q9BYK8 2649 aaKnown RBP22.65■■□□□ 1.22
PERM1-203ENST00000479361 OR2M5A3KFT3 312 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 CDHR4A6H8M9 788 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 LRRTM2O43300 516 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 WDR1O75083 606 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 SERPINB7O75635 380 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 LINGO3P0C6S8 592 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 PABPC4LP0CB38 370 aaKnown RBP22.64■■□□□ 1.21
PERM1-203ENST00000479361 GABRA1P14867 456 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 PCGF2P35227 344 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 GZMMP51124 257 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 KRT72Q14CN4 511 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 VMACQ2NL98 169 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 TMEM44Q2T9K0 475 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 ZNF585AQ6P3V2 769 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 ERICH5Q6P6B1 374 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 CALHM3Q86XJ0 350 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 CNOT9Q92600 299 aaKnown RBP22.64■■□□□ 1.21
PERM1-203ENST00000479361 PRDM14Q9GZV8 571 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 PIF1Q9H611 641 aa22.64■■□□□ 1.21
PERM1-203ENST00000479361 PRORSD1PA6NEY8 169 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 CCL21O00585 134 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 DNAJA2O60884 412 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 HOXD4P09016 255 aaPredicted RBP22.63■■□□□ 1.21
PERM1-203ENST00000479361 ESRRAP11474 423 aaPredicted RBP22.63■■□□□ 1.21
PERM1-203ENST00000479361 CPN1P15169 458 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 AQP1P29972 269 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 MNAT1P51948 309 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 EEF1A1P68104 462 aaKnown RBP22.63■■□□□ 1.21
PERM1-203ENST00000479361 SF3B4Q15427 424 aaKnown RBP eCLIP22.63■■□□□ 1.21
PERM1-203ENST00000479361 BCL2A1Q16548 175 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 EMC4Q5J8M3 183 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 C8orf82Q6P1X6 216 aaPredicted RBP22.63■■□□□ 1.21
PERM1-203ENST00000479361 MTFR2Q6P444 385 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 ZNF836Q6ZNA1 936 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 FJX1Q86VR8 437 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 GRAMD2AQ8IUY3 354 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 OR5M1Q8NGP8 315 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 TMEM234Q8WY98 164 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 ARL8BQ9NVJ2 186 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 DNAJB12Q9NXW2 375 aaKnown RBP22.63■■□□□ 1.21
PERM1-203ENST00000479361 CAMK2AQ9UQM7 478 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 FASNP49327 2511 aaKnown RBP22.63■■□□□ 1.21
PERM1-203ENST00000479361 FREM3P0C091 2139 aa22.63■■□□□ 1.21
PERM1-203ENST00000479361 E9PLN8 166 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 BCAS1O75363 584 aaPredicted RBP22.62■■□□□ 1.21
PERM1-203ENST00000479361 PEPDP12955 493 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 UQCRBP14927 111 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 POU3F2P20265 443 aaPredicted RBP22.62■■□□□ 1.21
PERM1-203ENST00000479361 ACVR2AP27037 513 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 ADH6P28332 368 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 PRKAR1BP31321 381 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 PTGER4P35408 488 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 CPA2P48052 419 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 PER3P56645 1201 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 PCBP3P57721 371 aaKnown RBP22.62■■□□□ 1.21
PERM1-203ENST00000479361 GTF3C1Q12789 2109 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 QPRTQ15274 297 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 DCST1Q5T197 706 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 PATL1Q86TB9 770 aaKnown RBP22.62■■□□□ 1.21
PERM1-203ENST00000479361 SLC15A3Q8IY34 581 aa22.62■■□□□ 1.21
PERM1-203ENST00000479361 FAM26EQ8N5C1 309 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms