RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SERPINB6P35237 376 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 CRYBA2P53672 197 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 SLC8A3P57103 927 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ABCE1P61221 599 aaKnown RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 STX1BP61266 288 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 RPS14P62263 151 aaKnown RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 OTUD4Q01804 1114 aaKnown RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 RCN2Q14257 317 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 SLC1A5Q15758 541 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 FILIP1LQ4L180 1135 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 GLRA4Q5JXX5 417 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF410Q86VK4 478 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 SLC47A2Q86VL8 602 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 NLRP14Q86W24 1093 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 IQCA1Q86XH1 822 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 NUP93Q8N1F7 819 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ABHD12Q8N2K0 398 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 EXOC6Q8TAG9 804 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 RASL10AQ92737 203 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 VMP1Q96GC9 406 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF597Q96LX8 424 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ATF6BQ99941 703 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 SOSTQ9BQB4 213 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 DDA1Q9BW61 102 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 CACNG6Q9BXT2 260 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 C2orf40Q9H1Z8 148 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 GCNT4Q9P109 453 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF319Q9P2F9 582 aa4.02□□□□□ -1.77
CCDC171-207ENST00000478913 NOL7Q9UMY1 257 aaKnown RBP4.02□□□□□ -1.77
CCDC171-207ENST00000478913 PLXNA2O75051 1894 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CACNA1CQ13936 2221 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 P2RX6O15547 441 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 RANBP6O60518 1105 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 STK17BO94768 372 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ERLIN2O94905 339 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CLDN9O95484 217 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 IGHV3-13P01766 116 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 LYNP07948 512 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 PLEKP08567 350 aaPredicted RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 UROSP10746 265 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 PCP11498 1178 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CPA3P15088 417 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ACADSP16219 412 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 HMGA1P17096 107 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 SHC1P29353 583 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CASP14P31944 242 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 RPL9P32969 192 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 TDO2P48775 406 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 TAF6P49848 677 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 SRPXP78539 464 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 RBBP4Q09028 425 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 C1orf61Q13536 156 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 KNOP1Q1ED39 458 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 SDHAF4Q5VUM1 108 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ALKBH5Q6P6C2 394 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 KCTD9Q7L273 389 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 MTERF4Q7Z6M4 381 aaKnown RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CATSPER3Q86XQ3 398 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CCDC170Q8IYT3 715 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 THEM5Q8N1Q8 247 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ZADH2Q8N4Q0 377 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 CCDC112Q8NEF3 446 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 GPR148Q8TDV2 347 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 LIPHQ8WWY8 451 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 C11orf52Q96A22 123 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ANKRD9Q96BM1 317 aaPredicted RBP4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ULK4Q96C45 1275 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 NAPBQ9H115 298 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 NEUROG2Q9H2A3 272 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 ZNF665Q9H7R5 613 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 PLEKHA3Q9HB20 300 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 RDH14Q9HBH5 336 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 IL1RAPL2Q9NP60 686 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 MED17Q9NVC6 651 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 FBXL12Q9NXK8 326 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 UBQLN2Q9UHD9 624 aa4.01□□□□□ -1.77
CCDC171-207ENST00000478913 HCFC1P51610 2035 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 PTPRJQ12913 1337 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 GTPBP10A4D1E9 387 aaKnown RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 ARHGEF33A8MVX0 844 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 NEDD8-MDP1E9PL57 170 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 CHUKO15111 745 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 MSH4O15457 936 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 AQP9O43315 295 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 SYT7O43581 403 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 TCF21O43680 179 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 CALCAP01258 141 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 SBK2P0C263 348 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 UBTFL1P0CB47 393 aaPredicted RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 EZRP15311 586 aaKnown RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 GATA1P15976 413 aaPredicted RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 TUFMP49411 452 aaKnown RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 CD300CQ08708 224 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 OVGP1Q12889 678 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 ITGB3BPQ13352 177 aaPredicted RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 RBMY1FQ15415 496 aaKnown RBP4□□□□□ -1.77
CCDC171-207ENST00000478913 RPS6KA1Q15418 735 aa4□□□□□ -1.77
CCDC171-207ENST00000478913 ECSCRQ19T08 205 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms