RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 FAM110BQ8TC76 370 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 MSI2Q96DH6 328 aaKnown RBP15.15■□□□□ 0.02
VIM-204ENST00000478746 ZNF382Q96SR6 550 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 RAB17Q9H0T7 212 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 CXorf36Q9H7Y0 433 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 PMF1-BGLAPU3KQ54 211 aa15.15■□□□□ 0.02
VIM-204ENST00000478746 HEATR1Q9H583 2144 aaKnown RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 RGS14O43566 566 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 SPRY1O43609 319 aaPredicted RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 KIAA0513O60268 411 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 KCNK2O95069 426 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 IFI6P09912 130 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 SBK3P0C264 359 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 MAGEA12P43365 314 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 ZNF83P51522 516 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 CHRNB3Q05901 458 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 RASGEF1BQ0VAM2 473 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 UNC50Q53HI1 259 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 UBAP2Q5T6F2 1119 aaKnown RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 ZNF551Q7Z340 670 aaPredicted RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 ZAR1Q86SH2 424 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 ZNF100Q8IYN0 542 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 TMEM151AQ8N4L1 468 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 CDRT4Q8N9R6 151 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 OR6Y1Q8NGX8 325 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.14■□□□□ 0.01
VIM-204ENST00000478746 HOXB13Q92826 284 aaPredicted RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 PSD2Q9BQI7 771 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 EML4Q9HC35 981 aaKnown RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 ING1Q9UK53 422 aaPredicted RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 WBP11Q9Y2W2 641 aaKnown RBP15.14■□□□□ 0.01
VIM-204ENST00000478746 TIMM22Q9Y584 194 aa15.14■□□□□ 0.01
VIM-204ENST00000478746 A0A1W2PQD3 144 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 CCDC151A5D8V7 595 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 LY6HO94772 140 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 NUDT14O95848 222 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 COX5AP20674 150 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 CD40P25942 277 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 LCN1P31025 176 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 GPC1P35052 558 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 PHBP35232 272 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 RAC3P60763 192 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 SPOCK1Q08629 439 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 HSPB3Q12988 150 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 CD226Q15762 336 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 ZNF678Q5SXM1 525 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 ZNF544Q6NX49 715 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 C12orf54Q6X4T0 127 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 RFLNBQ8N5W9 214 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 ZNF433Q8N7K0 673 aaPredicted RBP15.13■□□□□ 0.01
VIM-204ENST00000478746 OR52N5Q8NH56 324 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 ZFP90Q8TF47 636 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 PRR14Q9BWN1 585 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 COQ10BQ9H8M1 238 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 MYNNQ9NPC7 610 aa15.13■□□□□ 0.01
VIM-204ENST00000478746 CIB4A0PJX0 185 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 SERTM1A2A2V5 107 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 VWC2LB2RUY7 222 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 TCF21O43680 179 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 TGFAP01135 160 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 INHBAP08476 426 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 ACP2P11117 423 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 APEHP13798 732 aaKnown RBP15.12■□□□□ 0.01
VIM-204ENST00000478746 EDNRAP25101 427 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 SLC7A1P30825 629 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 PDLIM4P50479 330 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 CHRNEQ04844 493 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 B3GLCTQ6Y288 498 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 SLC16A11Q8NCK7 471 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 NUP43Q8NFH3 380 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 PHOSPHO1Q8TCT1 267 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 C3orf49Q96BT1 292 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 ZNF300Q96RE9 604 aaPredicted RBP15.12■□□□□ 0.01
VIM-204ENST00000478746 INPP5KQ9BT40 448 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 C12orf65Q9H3J6 166 aaKnown RBP15.12■□□□□ 0.01
VIM-204ENST00000478746 GPC6Q9Y625 555 aaPredicted RBP15.12■□□□□ 0.01
VIM-204ENST00000478746 ATP23Q9Y6H3 246 aa15.12■□□□□ 0.01
VIM-204ENST00000478746 A0A1W2PNR3 127 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 ESYT3A0FGR9 886 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 M0R1B8 84 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 KIF2AO00139 706 aaPredicted RBP15.11■□□□□ 0.01
VIM-204ENST00000478746 CYTIPO60759 359 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 RAD51DO75771 328 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 ENO1P06733 434 aaKnown RBP15.11■□□□□ 0.01
VIM-204ENST00000478746 TAC1P20366 129 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 CFPP27918 469 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 NR4A2P43354 598 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 SERPINB4P48594 390 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 ZNF117Q03924 483 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 SZRD1Q7Z422 152 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 MTERF4Q7Z6M4 381 aaKnown RBP15.11■□□□□ 0.01
VIM-204ENST00000478746 GALNT5Q7Z7M9 940 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 UBE2J2Q8N2K1 259 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 FBXO30Q8TB52 745 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 ZNF75CPQ92670 426 aaPredicted RBP15.11■□□□□ 0.01
VIM-204ENST00000478746 C1orf159Q96HA4 380 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 PIMREGQ9BSJ6 248 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
VIM-204ENST00000478746 ACSS3Q9H6R3 686 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 POLR3HQ9Y535 204 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms