RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-220ENST00000477528 UCHL1P09936 223 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 OPRD1P41143 372 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 GFOD2Q3B7J2 385 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 C4orf46Q504U0 113 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 TMPRSS12Q86WS5 348 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 PRR14Q9BWN1 585 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 LYRM4Q9HD34 91 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 NPIPB8E9PQR5 432 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 GABRPO00591 440 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 UBL4AP11441 157 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 PITPNBP48739 271 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 RPS25P62851 125 aaKnown RBP13.64□□□□□ -0.23
HDAC6-220ENST00000477528 XAF1Q6GPH4 301 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 NANOGP1Q8N7R0 232 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 C19orf47Q8N9M1 422 aaKnown RBP13.64□□□□□ -0.23
HDAC6-220ENST00000477528 FAM174AQ8TBP5 190 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 TMEM255BQ8WV15 326 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 LMF2Q9BU23 707 aaKnown RBP13.64□□□□□ -0.23
HDAC6-220ENST00000477528 PTGES2Q9H7Z7 377 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 HS3ST3A1Q9Y663 406 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 UPK1AO00322 258 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 CEACAM5P06731 702 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 IDUAP35475 653 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 AQP6Q13520 282 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 ACSM3Q53FZ2 586 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 SYT14P1Q58G82 188 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 AGAP6Q5VW22 663 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 HAVCR2Q8TDQ0 301 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 PPP1R14AQ96A00 147 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 TCTN2Q96GX1 697 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 C4orf36Q96KX1 117 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 AGAP4Q96P64 663 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 SEMA4GQ9NTN9 838 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 DAPP1Q9UN19 280 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 HTR1FP30939 366 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 GPNMBQ14956 572 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 COPZ2Q9P299 210 aa13.64□□□□□ -0.23
HDAC6-220ENST00000477528 A0A087WUU8 490 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 POM121BA6NF01 834 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 SLC35E2P0CK97 266 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 SSTR4P31391 388 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 PRSS36Q5K4E3 855 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 C1orf189Q5VU69 101 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 LACC1Q8IV20 430 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 ZFPM2Q8WW38 1151 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 HHIPQ96QV1 700 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 MMP28Q9H239 520 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 TTYH1Q9H313 450 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 POLE3Q9NRF9 147 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 GON4LQ3T8J9 2241 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 PSMD9O00233 223 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 PLRG1O43660 514 aaKnown RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 HPGDSO60760 199 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 GYPBP06028 91 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 GDI2P50395 445 aaKnown RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 TSPAN5P62079 268 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 SF3A2Q15428 464 aaKnown RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 EGFL6Q8IUX8 553 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 OR8H3Q8N146 312 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 TMEM246Q9BRR3 403 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 PFDN2Q9UHV9 154 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 MBD1Q9UIS9 605 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 TBX19O60806 448 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 IFNA7P01567 189 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 FUCA1P04066 466 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 TRIM23P36406 574 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 NKX2-5P52952 324 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-220ENST00000477528 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 PAQR7Q86WK9 346 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 CEP76Q8TAP6 659 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 DNAJA3Q96EY1 480 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 CACNG6Q9BXT2 260 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 UCKL1Q9NWZ5 548 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 MYO16Q9Y6X6 1858 aa13.63□□□□□ -0.23
HDAC6-220ENST00000477528 RASGEF1BQ0VAM2 473 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 MAPK14Q16539 360 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 DEFB133Q30KQ1 61 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 BTBD16Q32M84 506 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 ZER1Q7Z7L7 766 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 BMFQ96LC9 184 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 RHNO1Q9BSD3 238 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 EXO5Q9H790 373 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 BEX1Q9HBH7 125 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 SIRT5Q9NXA8 310 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 EIF1AYO14602 144 aaKnown RBP13.62□□□□□ -0.23
HDAC6-220ENST00000477528 RBBP9O75884 186 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 CHRM4P08173 479 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 H2AFB2P0C5Z0 115 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 ANXA3P12429 323 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 TEAD1P28347 426 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 CD38P28907 300 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 EIF1AXP47813 144 aaKnown RBP13.62□□□□□ -0.23
HDAC6-220ENST00000477528 TPMTP51580 245 aa13.62□□□□□ -0.23
HDAC6-220ENST00000477528 ZNF707Q96C28 371 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-220ENST00000477528 STACQ99469 402 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms