RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 LAT2Q9GZY6 243 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 NPHS2Q9NP85 383 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 EXD2Q9NVH0 621 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 CCDC167Q9P0B6 97 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 ZNF629Q9UEG4 869 aaPredicted RBP12.29□□□□□ -0.44
RAB5A-208ENST00000476544 L3MBTL1Q9Y468 752 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 CHST2Q9Y4C5 530 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 FREM3P0C091 2139 aa12.29□□□□□ -0.44
RAB5A-208ENST00000476544 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 AGAP5A6NIR3 686 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 H0Y3Z8 333 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 H3BML4 177 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 LINC01387J3KSC0 135 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 GTPBP1O00178 669 aaKnown RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 EIF4E2O60573 245 aaKnown RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 TNFSF13O75888 250 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 AQP8O94778 261 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 POU3F2P20265 443 aaPredicted RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 CTSSP25774 331 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 SF3A3Q12874 501 aaKnown RBP eCLIP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 LRIF1Q5T3J3 769 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 LRRC74BQ6ZQY2 392 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 C16orf62Q7Z3J2 963 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 RETREG3Q86VR2 466 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 DMRTC2Q8IXT2 367 aaPredicted RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 FBXO27Q8NI29 283 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 SLC38A5Q8WUX1 472 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 CNOT9Q92600 299 aaKnown RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 SPDL1Q96EA4 605 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 THUMPD3Q9BV44 507 aaKnown RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 IKZF5Q9H5V7 419 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 MTHFD2LQ9H903 347 aaPredicted RBP12.28□□□□□ -0.44
RAB5A-208ENST00000476544 POLE3Q9NRF9 147 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 VAPAQ9P0L0 249 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 WDR45Q9Y484 360 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 GMEB1Q9Y692 573 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 PDZD2O15018 2839 aa12.28□□□□□ -0.44
RAB5A-208ENST00000476544 KIAA1549Q9HCM3 1950 aa12.27□□□□□ -0.44
RAB5A-208ENST00000476544 A0A096LPI6 279 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 CLIC1O00299 241 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 ZNF264O43296 627 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 KRT75O95678 551 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 AGR2O95994 175 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 IL2RAP01589 272 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 BMP2P12643 396 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 PRKCAP17252 672 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 BMP5P22003 454 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 RPS4Y1P22090 263 aaKnown RBP12.27□□□□□ -0.45
RAB5A-208ENST00000476544 KIR2DL2P43627 348 aaPredicted RBP12.27□□□□□ -0.45
RAB5A-208ENST00000476544 KHKP50053 298 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 RAC1P63000 192 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 KCNJ10P78508 379 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 FOXF1Q12946 379 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 SF3B4Q15427 424 aaKnown RBP eCLIP12.27□□□□□ -0.45
RAB5A-208ENST00000476544 GUSBP1Q15486 140 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 RGNQ15493 299 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 SLC25A35Q3KQZ1 300 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 FBXL19-AS1Q494R0 122 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 MCEMP1Q8IX19 187 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 ZNF619Q8N2I2 560 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 METTL25Q8N6Q8 603 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 TRIML2Q8N7C3 387 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 ZNF527Q8NB42 609 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 FNDC9Q8TBE3 224 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 ZBTB8AQ96BR9 441 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 INTS12Q96CB8 462 aaKnown RBP12.27□□□□□ -0.45
RAB5A-208ENST00000476544 STARD4Q96DR4 205 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 ZNF317Q96PQ6 595 aaPredicted RBP12.27□□□□□ -0.45
RAB5A-208ENST00000476544 CCDC134Q9H6E4 229 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 TMEM45AQ9NWC5 275 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 LIPT1Q9Y234 373 aa12.27□□□□□ -0.45
RAB5A-208ENST00000476544 A0A1W2PP18 115 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 FAM47E-STBD1D6RA91 191 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 SEC14L5O43304 696 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 IL18BPO95998 194 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 CSTAP01040 98 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 CGAP01215 116 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 UBTFL6P0CB48 400 aaPredicted RBP12.26□□□□□ -0.45
RAB5A-208ENST00000476544 TMIGD3P0DMS9 266 aaPredicted RBP12.26□□□□□ -0.45
RAB5A-208ENST00000476544 UBL4AP11441 157 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 ZNF17P17021 662 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 NCF2P19878 526 aaPredicted RBP12.26□□□□□ -0.45
RAB5A-208ENST00000476544 GCKP35557 465 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 MAGEA8P43361 318 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 SUMO3P55854 103 aaPredicted RBP12.26□□□□□ -0.45
RAB5A-208ENST00000476544 SESN3P58005 492 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 SQLEQ14534 574 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 QPRTQ15274 297 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 ADRM1Q16186 407 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 GPAT3Q53EU6 434 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 MEX3BQ6ZN04 569 aaKnown RBP12.26□□□□□ -0.45
RAB5A-208ENST00000476544 BTLAQ7Z6A9 289 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 GCNT2Q8N0V5 402 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 LILRA2Q8N149 483 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 CLIP4Q8N3C7 705 aa12.26□□□□□ -0.45
RAB5A-208ENST00000476544 ZNF614Q8N883 585 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms