RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 YTHDF3Q7Z739 585 aaKnown RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PRIMA1Q86XR5 153 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 P3H2Q8IVL5 708 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 MISPQ8IVT2 679 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 HOMEZQ8IX15 550 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 CLECL1Q8IZS7 167 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 GABRG1Q8N1C3 465 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 OR5D16Q8NGK9 328 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 OR5AK3PQ8NH89 298 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 RAB3IL1Q8TBN0 382 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PHOSPHO1Q8TCT1 267 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 RNF128Q8TEB7 428 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 AENQ8WTP8 325 aaKnown RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.25□□□□□ -1.418e-7■■■■■ 32.1
HDAC3-207ENST00000475549 OR5P2Q8WZ92 322 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF75CPQ92670 426 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 CAVIN3Q969G5 261 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 S100PBPQ96BU1 408 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ZG16BQ96DA0 208 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PERPQ96FX8 193 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PLPPR2Q96GM1 343 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PPP3R2Q96LZ3 170 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 OR7D2Q96RA2 312 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 SDF2Q99470 211 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 CCL19Q99731 98 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ACTRT3Q9BYD9 372 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PRRG4Q9BZD6 226 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ACTR6Q9GZN1 396 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 C12orf49Q9H741 205 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 COQ10BQ9H8M1 238 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 EML4Q9HC35 981 aaKnown RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 GLRX2Q9NS18 164 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 GPR52Q9Y2T5 361 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 EMC9Q9Y3B6 208 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 DTNAQ9Y4J8 743 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ACTL7BQ9Y614 415 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 FBN1P35555 2871 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 IGHV3-15A0A0B4J1V0 119 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PRAMEF27A3QJZ7 478 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 TMEM114B3SHH9 223 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 C9JVG2 144 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ANKRD28O15084 1053 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 SMAD7O15105 426 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ARHGEF9O43307 516 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ADAM11O75078 769 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 SKAP2O75563 359 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 UGT2B17O75795 530 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 HSPA4LO95757 839 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 HEXAP06865 529 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 TUBBP07437 444 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 HPGDP15428 266 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PPP3CBP16298 524 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PSMB1P20618 241 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PRPS1L1P21108 318 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 FPR1P21462 350 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 NTF4P34130 210 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 HPCAL1P37235 193 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 EIF1P41567 113 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 P2RX1P51575 399 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ATP12AP54707 1039 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 CASP9P55211 416 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 CTBP2P56545 445 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 CLDN8P56748 225 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 C21orf58P58505 322 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PLAURQ03405 335 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 EMX2Q04743 252 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 TP53BP2Q13625 1128 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 TAB1Q15750 504 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 MAPK14Q16539 360 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ATP6AP1LQ52LC2 224 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 SLC25A53Q5H9E4 307 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 BEX5Q5H9J7 111 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 AP1ARQ63HQ0 302 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 TFAP2EQ6VUC0 442 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF704Q6ZNC4 412 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 C20orf204Q6ZNR8 217 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 BEND4Q6ZU67 534 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PLEKHM3Q6ZWE6 761 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 C6orf120Q7Z4R8 191 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 MTERF4Q7Z6M4 381 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 WFDC8Q8IUA0 241 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF781Q8N8C0 355 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 FNDC5Q8NAU1 212 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ATP6V1C2Q8NEY4 427 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 OR56A1Q8NGH5 318 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ADAMTS15Q8TE58 950 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 NEUROG1Q92886 237 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF775Q96BV0 537 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ZBTB9Q96C00 473 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 TUBGCP3Q96CW5 907 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 CHMP6Q96FZ7 201 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 SORT1Q99523 831 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 THUMPD3Q9BV44 507 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 DUSP26Q9BV47 211 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 GSX2Q9BZM3 304 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 HOXD1Q9GZZ0 328 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 IQCGQ9H095 443 aaKnown RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 AKTIPQ9H8T0 292 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF701Q9NV72 531 aaPredicted RBP6.24□□□□□ -1.41
HDAC3-207ENST00000475549 PAQR5Q9NXK6 330 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms