RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SSPNQ14714 243 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 CD226Q15762 336 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 C1orf94Q6P1W5 598 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 TTC33Q6PID6 262 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-210ENST00000475329 C16orf47Q6ZP98 133 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-210ENST00000475329 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 PPP1R32Q7Z5V6 425 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF786Q8N393 782 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 LSMEM1Q8N8F7 131 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 POGLUT1Q8NBL1 392 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 RNF217Q8TC41 542 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 GRHL3Q8TE85 626 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 GPR87Q9BY21 358 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 ZBTB20Q9HC78 741 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-210ENST00000475329 SELENONQ9NZV5 590 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 MYOTQ9UBF9 498 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 NDRG4Q9ULP0 352 aaKnown RBP12.6□□□□□ -0.39
TRAF4-210ENST00000475329 MYRFQ9Y2G1 1151 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 DMDP11532 3685 aa12.6□□□□□ -0.39
TRAF4-210ENST00000475329 CPAMD8Q8IZJ3 1885 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 STMND1H3BQB6 276 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 NDUFB5O43674 189 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 ADAM11O75078 769 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 CEACAM1P13688 526 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 OSMP13725 252 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 CD82P27701 267 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 EVI2BP34910 448 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 RYKP34925 604 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 GGT2P36268 569 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 SLC6A8P48029 635 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 CCR4P51679 360 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 COPZ1P61923 177 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 RPP38P78345 283 aaKnown RBP12.59□□□□□ -0.39
TRAF4-210ENST00000475329 IL5RAQ01344 420 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 COX10Q12887 443 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 BLMHQ13867 455 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 DESI1Q6ICB0 168 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 TMEM154Q6P9G4 183 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 APOOLQ6UXV4 268 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 ASCL5Q7RTU5 278 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 CADM2Q8N3J6 435 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 SLC15A4Q8N697 577 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 TMEM255BQ8WV15 326 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 NACC2Q96BF6 587 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 TMCO6Q96DC7 493 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 MPP4Q96JB8 637 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 HRASLS5Q96KN8 279 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 HS6ST2Q96MM7 605 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 PRSS27Q9BQR3 290 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 ZNF160Q9HCG1 818 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 CARD8Q9Y2G2 431 aa12.59□□□□□ -0.39
TRAF4-210ENST00000475329 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 TERTO14746 1132 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 OIP5O43482 229 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 SCO2O43819 266 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 PIP5K1CO60331 668 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 FADS1O60427 444 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 OR2J2O76002 312 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 NTN1O95631 604 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 HPP00738 406 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 LINGO3P0C6S8 592 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 EPHA2P29317 976 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 RBMS1P29558 406 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 RBM34P42696 430 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 OMPP47874 163 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 NOVA1P51513 510 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 CRISP1P54107 249 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 FBXW4P57775 412 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 ALDH6A1Q02252 535 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 TSPAN31Q12999 210 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 KCTD21Q4G0X4 260 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 ALG10BQ5I7T1 473 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 ULK3Q6PHR2 472 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 ISLR2Q6UXK2 745 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 NUP54Q7Z3B4 507 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 PRICKLE2Q7Z3G6 844 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 MARCH3Q86UD3 253 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 RAB43Q86YS6 212 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 MISPQ8IVT2 679 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 RNF113BQ8IZP6 322 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 GALNT15Q8N3T1 639 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 DNAJA4Q8WW22 397 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 TMEM239Q8WW34 195 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 TTC9Q92623 222 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 HGDQ93099 445 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 ARSGQ96EG1 525 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 FAM46AQ96IP4 442 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 YTHDF1Q9BYJ9 559 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 RYDENQ9NUL5 291 aaKnown RBP12.58□□□□□ -0.4
TRAF4-210ENST00000475329 REV1Q9UBZ9 1251 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 FBXL4Q9UKA2 621 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 TMEM5Q9Y2B1 443 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 MPDZO75970 2070 aa12.58□□□□□ -0.4
TRAF4-210ENST00000475329 PCSK5Q92824 1860 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms