RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 DPAGT1Q9H3H5 408 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 FKRPQ9H9S5 495 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NRBP2Q9NSY0 501 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 UBP1Q9NZI7 540 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SERTAD3Q9UJW9 196 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 RPH3AQ9Y2J0 694 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 HDGFL3Q9Y3E1 203 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TEX13DA0A0J9YY54 714 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 FAM221BA6H8Z2 402 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR6C76A6NM76 312 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ISM1B1AKI9 464 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LOC730098B7Z3J9 87 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 MASP2O00187 686 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 HMGN4O00479 90 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 KPNA3O00505 521 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 BCL2L11O43521 198 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 KDELR3O43731 214 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NCR1O76036 304 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 DDNO94850 711 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 APBB3O95704 486 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LPOP22079 712 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 DNASE1P24855 282 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ITGA3P26006 1051 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ACRV1P26436 265 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 EPHA8P29322 1005 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 SHC1P29353 583 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PDHA2P29803 388 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CAPZA2P47755 286 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 KCNJ3P48549 501 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CAV3P56539 151 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 GK2Q14410 553 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 SLC25A35Q3KQZ1 300 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 UBE2NLQ5JXB2 153 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 MTFR2Q6P444 385 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 FDX2Q6P4F2 183 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 IL34Q6ZMJ4 242 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF783Q6ZMS7 281 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 C17orf107Q6ZR85 190 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 IKBIPQ70UQ0 350 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ANKRD46Q86W74 232 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 GPR65Q8IYL9 337 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CLECL1Q8IZS7 167 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR8H2Q8N162 312 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 C7orf57Q8NEG2 295 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 WDR36Q8NI36 951 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 SLC22A8Q8TCC7 542 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ADAMTS17Q8TE56 1095 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SSC4DQ8WTU2 575 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TMEM40Q8WWA1 233 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 DIRAS2Q96HU8 199 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LRFN5Q96NI6 719 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZBTB18Q99592 522 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NUDT16L1Q9BRJ7 211 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 RNF126Q9BV68 326 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TLNRD1Q9H1K6 362 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SMOC1Q9H4F8 434 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ADGRL4Q9HBW9 690 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZFP57Q9NU63 452 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 DECR2Q9NUI1 292 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 DDX28Q9NUL7 540 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 NUDT15Q9NV35 164 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CLN6Q9NWW5 311 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 RGS17Q9UGC6 210 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 KCNG2Q9UJ96 466 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PCDHGC4Q9Y5F7 938 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PCDHGA1Q9Y5H4 931 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LOC100506127A0A0U1RQW1 187 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 FIGNL2A6NMB9 653 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 HNRNPCL2B2RXH8 293 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 G3V3G9 751 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 M0R233 179 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 DFFAO00273 331 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 BTN3A3O00478 584 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CLDN5O00501 218 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR2T1O43869 369 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NIPSNAP2O75323 286 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PRAMEF12O95522 483 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 AK1P00568 194 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 HRGP04196 525 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 HIST1H1BP16401 226 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 ACKR3P25106 362 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SSTR2P30874 369 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 RENBPP51606 427 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 YBEYP58557 167 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 SLC26A5P58743 744 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LSM6P62312 80 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 HBA1P69905 142 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LSM11P83369 360 aaKnown RBP eCLIP3.79□□□□□ -1.8
USP16-205ENST00000474835 SMAD1Q15797 465 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 C4orf46Q504U0 113 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 MANEAQ5SRI9 462 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TPGS2Q68CL5 300 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF529Q6P280 563 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NHLRC1Q6VVB1 395 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 HEPN1Q6WQI6 88 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 REC114Q7Z4M0 266 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 BCDIN3DQ7Z5W3 292 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 GPSM1Q86YR5 675 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LRRC17Q8N6Y2 441 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF454Q8N9F8 522 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms