RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 MYL2P10916 166 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 EFNA1P20827 205 aaPredicted RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 ELK4P28324 431 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 MAP3K8P41279 467 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 EIF1P41567 113 aaKnown RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 NUDT6P53370 316 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 MANFP55145 182 aaKnown RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 C21orf58P58505 322 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 ZNF117Q03924 483 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 ITGADQ13349 1161 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 ZNF385BQ569K4 471 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 TIFABQ6ZNK6 161 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 HDXQ7Z353 690 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 TRIM46Q7Z4K8 759 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 LCA5Q86VQ0 697 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 CLHC1Q8NHS4 586 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 HOXB13Q92826 284 aaPredicted RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 C16orf58Q96GQ5 468 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 TRAF4Q9BUZ4 470 aaPredicted RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 TRIM2Q9C040 744 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 IQCGQ9H095 443 aaKnown RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 BARX1Q9HBU1 254 aaPredicted RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 FAIMQ9NVQ4 179 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
CCDC78-209ENST00000474647 SH3BP4Q9P0V3 963 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 LGALS13Q9UHV8 139 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 PTGDR2Q9Y5Y4 395 aa12.42□□□□□ -0.42
CCDC78-209ENST00000474647 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 A0A1W2PQD3 144 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 DPRXA6NFQ7 191 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 SMIM23A6NLE4 172 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 PHF1O43189 567 aaPredicted RBP12.41□□□□□ -0.42
CCDC78-209ENST00000474647 GPRIN2O60269 458 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 PRKD3O94806 890 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 YES1P07947 543 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 PYGBP11216 843 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 SERPINB4P48594 390 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 POU6F2P78424 691 aaPredicted RBP12.41□□□□□ -0.42
CCDC78-209ENST00000474647 PPA1Q15181 289 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 TMEM176BQ3YBM2 270 aaPredicted RBP12.41□□□□□ -0.42
CCDC78-209ENST00000474647 CFAP157Q5JU67 520 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 CLEC6AQ6EIG7 209 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 SEZ6L2Q6UXD5 910 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 DNM1P46Q6ZS02 220 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
CCDC78-209ENST00000474647 TMCO5AQ8N6Q1 288 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 RFWD2Q8NHY2 731 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 PIWIL2Q8TC59 973 aaKnown RBP12.41□□□□□ -0.42
CCDC78-209ENST00000474647 FAM110BQ8TC76 370 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 ZFP90Q8TF47 636 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 MZB1Q8WU39 189 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 CDS1Q92903 461 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 RHNO1Q9BSD3 238 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 REEP4Q9H6H4 257 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 COQ10BQ9H8M1 238 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 VIPAS39Q9H9C1 493 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 GIN1Q9NXP7 522 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 FIS1Q9Y3D6 152 aa12.41□□□□□ -0.42
CCDC78-209ENST00000474647 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 ZNF195O14628 629 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 ABCD4O14678 606 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 OIP5O43482 229 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 EFNA2O43921 213 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 CD8AP01732 235 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 ATP6V1C1P21283 382 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 ENPP1P22413 925 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 SLC7A1P30825 629 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 RPL38P63173 70 aaKnown RBP12.4□□□□□ -0.42
CCDC78-209ENST00000474647 P2RY6Q15077 328 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 NRF1Q16656 503 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 NDUFAF6Q330K2 333 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 KRT71Q3SY84 523 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 CEP85LQ5SZL2 805 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 C6orf52Q5T4I8 152 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 CBLN3Q6UW01 205 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 Q6ZT83 130 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 FRMD7Q6ZUT3 714 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 CROCCP2Q86T23 111 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
CCDC78-209ENST00000474647 ZNF614Q8N883 585 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 CCDC126Q96EE4 140 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 BTBD2Q9BX70 525 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 TNFRSF12AQ9NP84 129 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 C1orf109Q9NX04 203 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 KLHL9Q9P2J3 617 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 TBK1Q9UHD2 729 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 CARD8Q9Y2G2 431 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
CCDC78-209ENST00000474647 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 NBEAL1Q6ZS30 2694 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 A0A1W2PNR3 127 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 TLDC2A0PJX2 215 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 FAM234BA2RU67 622 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 SHISA9B4DS77 424 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms