RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ANGPTL5Q86XS5 388 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF619Q8N2I2 560 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM71CQ8NEG0 241 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM185AQ8NFB2 350 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR5T1Q8NG75 326 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CYP2W1Q8TAV3 490 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CD99L2Q8TCZ2 262 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PHYHIPLQ96FC7 376 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF583Q96ND8 569 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MAPKAP1Q9BPZ7 522 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MIEF1Q9NQG6 463 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 AIG1Q9NVV5 245 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PDP1Q9P0J1 537 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ELOVL7A1L3X0 281 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2AT4A6NND4 320 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 NPIPB8E9PQR5 432 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 K7ERQ8 282 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MATN3O15232 486 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC16A4O15374 487 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 B3GALT2O43825 422 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2T1O43869 369 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MPZL2O60487 215 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TPST2O60704 377 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ANXA9O76027 345 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2A4O95047 310 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GLP2RO95838 553 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 IFNA17P01571 189 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 VTNP04004 478 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HIST1H2ABP04908 130 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GKN3PP0CG01 181 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 C1GALT1C1LP0DN25 315 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CPN1P15169 458 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 STK19P49842 368 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SELENOPP49908 381 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF280AP59817 542 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 RAB10P61026 200 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 RBX1P62877 108 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CRADDP78560 199 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TWF1Q12792 350 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 MLLT11Q13015 90 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM255AQ5JRV8 349 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PHF19Q5T6S3 580 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 RNLSQ5VYX0 342 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 LPCAT3Q6P1A2 487 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM199XQ6PEV8 388 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CLEC9AQ6UXN8 241 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HIST3H2AQ7L7L0 130 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 SMIM15Q7Z3B0 74 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 KDELC2Q7Z4H8 507 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 VRK3Q8IV63 474 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ZDHHC21Q8IVQ6 265 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CEP97Q8IW35 865 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CDK20Q8IZL9 346 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 RPLP0P6Q8NHW5 317 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 LCN9Q8WX39 176 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HIST1H2ACQ93077 130 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 HIST1H2BAQ96A08 127 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM143Q96AN5 459 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OTUB2Q96DC9 234 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 CDKN2AIPNLQ96HQ2 116 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PYURFQ96I23 114 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2A7Q96R45 310 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PIGQQ9BRB3 760 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM208Q9BTX3 173 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ALG8Q9BVK2 526 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 ARL6Q9H0F7 186 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 DMRT3Q9NQL9 472 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 PRMT7Q9NVM4 692 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 TXNL4BQ9NX01 149 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 LUZP4Q9P127 313 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 UBQLN1Q9UMX0 589 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 GTF2A1LQ9UNN4 478 aa4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 LSM2Q9Y333 95 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-206ENST00000473684 COL2A1P02458 1487 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A1W2PPE3 182 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 LNP1A1A4G5 178 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SYNDIG1LA6NDD5 238 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 A8MT66 165 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 B4E171 279 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PRR23D1E9PI22 279 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 GFYI3L273 518 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CASKO14936 926 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RHOP08100 348 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PRR23D2P0DMB1 279 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 GAAP10253 952 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 HGFP14210 728 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 AHCYP23526 432 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 MIPP30301 263 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PCGF2P35227 344 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 NPBWR1P48145 328 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ANXA11P50995 505 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 HSD11B2P80365 405 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TAP2Q03519 686 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PPP1R8Q12972 351 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ACSM5Q6NUN0 579 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CERS6Q6ZMG9 384 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 C15orf39Q6ZRI6 1047 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RANBP3LQ86VV4 465 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 C1QL4Q86Z23 238 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ZBTB8OSQ8IWT0 167 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms