RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RPE65Q16518 533 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 RNASE12Q5GAN4 147 aaKnown RBP19.6■□□□□ 0.73
COL18A1-207ENST00000473212 CEACAM19Q7Z692 300 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 OR11H7Q8NGC8 314 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 TRMT10AQ8TBZ6 339 aaKnown RBP19.6■□□□□ 0.73
COL18A1-207ENST00000473212 TTTY10Q9BZA0 68 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 CLEC4AQ9UMR7 237 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 STON1Q9Y6Q2 735 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 MEN1O00255 615 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 MAKP20794 623 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 AK4P27144 223 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 RPS7P62081 194 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 GALEQ14376 348 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 SLC25A35Q3KQZ1 300 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF431Q8TF32 576 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 SMARCD2Q92925 531 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 KISS1RQ969F8 398 aaPredicted RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 KCTD12Q96CX2 325 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 KLHL1Q9NR64 748 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 MGAT4AQ9UM21 535 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 ING4Q9UNL4 249 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 CA5BQ9Y2D0 317 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 WDR45Q9Y484 360 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 LINC01553A4QN01 128 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 SLC9B1P1A6NJY1 282 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 LEUTXA8MZ59 168 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 CLUP10909 449 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 HTR2AP28223 471 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF136P52737 540 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 ARFIP1P53367 373 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 SEC13P55735 322 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 TRMT12Q53H54 448 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 PRPF38BQ5VTL8 546 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 HEPHL1Q6MZM0 1159 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 MFSD12Q6NUT3 480 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 OR52L1Q8NGH7 329 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 BRIX1Q8TDN6 353 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 AHCYL2Q96HN2 611 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 PRSS27Q9BQR3 290 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 OR51V1Q9H2C8 321 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 GHITMQ9H3K2 345 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 FGF22Q9HCT0 170 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 SIDT1Q9NXL6 827 aaKnown RBP19.59■□□□□ 0.73
COL18A1-207ENST00000473212 FBXL4Q9UKA2 621 aa19.59■□□□□ 0.73
COL18A1-207ENST00000473212 BHLHE40O14503 412 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 SLC31A1O15431 190 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 SOX30O94993 753 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 STOMP27105 288 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 TEAD1P28347 426 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 PDGFRLQ15198 375 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 CEBPEQ15744 281 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 DEFB134Q4QY38 66 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 ZBTB37Q5TC79 503 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 RPTNQ6XPR3 784 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 CCDC28AQ8IWP9 274 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF655Q8N720 491 aaPredicted RBP19.58■□□□□ 0.73
COL18A1-207ENST00000473212 C17orf47Q8NEP4 570 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 BADQ92934 168 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 SCMH1Q96GD3 660 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 MTHFD2LQ9H903 347 aaPredicted RBP19.58■□□□□ 0.73
COL18A1-207ENST00000473212 CERS4Q9HA82 394 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 ZFP64Q9NPA5 681 aa19.58■□□□□ 0.73
COL18A1-207ENST00000473212 KRCC1Q9NPI7 259 aaPredicted RBP19.58■□□□□ 0.73
COL18A1-207ENST00000473212 A0A0G2JK05 382 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 PEX12O00623 359 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 FZD7O75084 574 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 IGFALSP35858 605 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 ACVR1BP36896 505 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 ANGPT1Q15389 498 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 SLC36A2Q495M3 483 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 ESCO2Q56NI9 601 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 LYPD4Q6UWN0 246 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 THSD4Q6ZMP0 1018 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 CCL4L1Q8NHW4 92 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 ABHD4Q8TB40 342 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 CD180Q99467 661 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 PLA2G2FQ9BZM2 168 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 PHPT1Q9NRX4 125 aaPredicted RBP19.58■□□□□ 0.72
COL18A1-207ENST00000473212 SLCO1C1Q9NYB5 712 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 KCNE5Q9UJ90 142 aa19.58■□□□□ 0.72
COL18A1-207ENST00000473212 C7orf66A4D0T2 115 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 ZSCAN5BA6NJL1 495 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 P2RX6O15547 441 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 MT-ND5P03915 603 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 RD3Q7Z3Z2 195 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 NRROSQ86YC3 692 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 PTP4A1Q93096 173 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 NDC1Q9BTX1 674 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 DPAGT1Q9H3H5 408 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 TBC1D29Q9UFV1 150 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 DUXAA6NLW8 204 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 J3QLW9 94 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 CD3GP09693 182 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 ZNF19P17023 458 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 BMP7P18075 431 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 NOS3P29474 1203 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 PER3P56645 1201 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 ZNF425Q6IV72 752 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 PYHIN1Q6K0P9 492 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 C4orf36Q96KX1 117 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms