RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SERINC4A6NH21 518 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 H0YC42 278 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 FXYD1O00168 92 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 PRRG2O14669 202 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 EFNA2O43921 213 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 AK1P00568 194 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 BMP2P12643 396 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 IL11P20809 199 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 RPS4Y1P22090 263 aaKnown RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 PSMA4P25789 261 aaKnown RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 CRATP43155 626 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 LHX2P50458 406 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 DSTNP60981 165 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 MXRA7P84157 204 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 BNIP1Q12981 228 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 ADRM1Q16186 407 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 SPATS1Q496A3 300 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 GPAT3Q53EU6 434 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 RPS26P11Q5JNZ5 115 aaPredicted RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 C16orf89Q6UX73 402 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 RPTNQ6XPR3 784 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 ARHGAP24Q8N264 748 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 ZNF619Q8N2I2 560 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 OR14L1PQ8NHC6 308 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 PHOSPHO1Q8TCT1 267 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 ABTB1Q969K4 478 aaPredicted RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 TRNT1Q96Q11 434 aaKnown RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 SLC39A3Q9BRY0 314 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 HOXD1Q9GZZ0 328 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 EXO5Q9H790 373 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 SDHAF3Q9NRP4 125 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 THUMPD1Q9NXG2 353 aaKnown RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 SUCOQ9UBS9 1254 aaKnown RBP11.86□□□□□ -0.51
TPM3-216ENST00000473036 ACAD8Q9UKU7 415 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 L3MBTL1Q9Y468 752 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 WDR45Q9Y484 360 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 MED12LQ86YW9 2145 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 DSPPQ9NZW4 1301 aa11.86□□□□□ -0.51
TPM3-216ENST00000473036 CCDC168Q8NDH2 2452 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 OR2M5A3KFT3 312 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 EVPLLA8MZ36 301 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 E9PLN8 166 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 MRASO14807 208 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 BCKDKO14874 412 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 DNAJA2O60884 412 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 AGR2O95994 175 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 HK1P19367 917 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 PGM1P36871 562 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ADH7P40394 386 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 CLK3P49761 638 aaKnown RBP11.85□□□□□ -0.51
TPM3-216ENST00000473036 SUCLG1P53597 346 aaKnown RBP11.85□□□□□ -0.51
TPM3-216ENST00000473036 CLDN18P56856 261 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 SKP2Q13309 424 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 NFYCQ13952 458 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
TPM3-216ENST00000473036 FGFBP1Q14512 234 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 TRMT5Q32P41 509 aaKnown RBP11.85□□□□□ -0.51
TPM3-216ENST00000473036 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ATAD3BQ5T9A4 648 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 LRRC74BQ6ZQY2 392 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 DHDDSQ86SQ9 333 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 IFNEQ86WN2 208 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ULK2Q8IYT8 1036 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ZNF808Q8N4W9 903 aaPredicted RBP11.85□□□□□ -0.51
TPM3-216ENST00000473036 POU5F2Q8N7G0 328 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ZNF614Q8N883 585 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 FAM71CQ8NEG0 241 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 B4GALNT2Q8NHY0 566 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 GPR119Q8TDV5 335 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ITLN2Q8WWU7 325 aaPredicted RBP11.85□□□□□ -0.51
TPM3-216ENST00000473036 SARAFQ96BY9 339 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 TMEM19Q96HH6 336 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 VKORC1Q9BQB6 163 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 MED17Q9NVC6 651 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 DKKL1Q9UK85 242 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 VDAC3Q9Y277 283 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ZNF337Q9Y3M9 751 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 MTORP42345 2549 aa11.85□□□□□ -0.51
TPM3-216ENST00000473036 ITPR3Q14573 2671 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
TPM3-216ENST00000473036 AGAP5A6NIR3 686 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 AIM2O14862 343 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 HCRTR2O43614 444 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 TOXO94900 526 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 UBOX5O94941 541 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 BCHEP06276 602 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 GLI4P10075 376 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 NR2F1P10589 423 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 GPX2P18283 190 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 AGAP20933 346 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 ACVR2AP27037 513 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 GZMMP51124 257 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 NUP107P57740 925 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 MTPNP58546 118 aa11.84□□□□□ -0.51
TPM3-216ENST00000473036 ZSCAN26Q16670 478 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms