RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 NHLRC1Q6VVB1 395 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 FGD2Q7Z6J4 655 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 ATG4DQ86TL0 474 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 EPHX4Q8IUS5 362 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 PEX5LQ8IYB4 626 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 PIK3C3Q8NEB9 887 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 TNIP2Q8NFZ5 429 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 OR2M7Q8NG81 312 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 FAM162AQ96A26 154 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 C3orf49Q96BT1 292 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 VPS50Q96JG6 964 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 RNF145Q96MT1 663 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF300Q96RE9 604 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF607Q96SK3 696 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 OSBPL11Q9BXB4 747 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 AGPAT4Q9NRZ5 378 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 CNIH4Q9P003 139 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 MED11Q9P086 117 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 SEC14L3Q9UDX4 400 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 TP53TG5Q9Y2B4 290 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 SH3GLB1Q9Y371 365 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 RRP15Q9Y3B9 282 aaKnown RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 MAGED1Q9Y5V3 778 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 V9GYQ6 96 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 A0A1B0GWA3 101 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SHISA8B8ZZ34 492 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 C5orf58C9J3I9 102 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF264O43296 627 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SUV39H1O43463 412 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 KLF4O43474 513 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 NDUFB5O43674 189 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 PEX1O43933 1283 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 FMO6PO60774 539 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SERPINB7O75635 380 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 TIPRLO75663 272 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SLC25A12O75746 678 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 PDE9AO76083 593 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF682O95780 498 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 CSTAP01040 98 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 GPIP06744 558 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 UBTFL6P0CB48 400 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 UBL4AP11441 157 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 IL7RP16871 459 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF26P17031 533 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 PRKCAP17252 672 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ATP6V1C1P21283 382 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SHC1P29353 583 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 IL12BP29460 328 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 YAP1P46937 504 aaKnown RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 GPR85P60893 370 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 AP2B1P63010 937 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 LTBQ06643 244 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 C19orf57Q0VDD7 668 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 PPP1R8Q12972 351 aaKnown RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 RIPK1Q13546 671 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 COL28A1Q2UY09 1125 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 PLPPR5Q32ZL2 321 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 NADK2Q4G0N4 442 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 IFI44LQ53G44 452 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 C19orf48Q6RUI8 117 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF771Q7L3S4 317 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 GALNTL5Q7Z4T8 443 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ADGRG3Q86Y34 549 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 NKAIN4Q8IVV8 208 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 HS3ST5Q8IZT8 346 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 TMEM156Q8N614 296 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 OR5W2Q8NH69 310 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 NRG4Q8WWG1 115 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 LRTOMTQ8WZ04 291 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 TMCO6Q96DC7 493 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 TPD52L3Q96J77 140 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 RAB3IPQ96QF0 476 aaPredicted RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SEPHS2Q99611 448 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 UTP23Q9BRU9 249 aaKnown RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 DSN1Q9H410 356 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 MED17Q9NVC6 651 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ANAPC2Q9UJX6 822 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SAMD4AQ9UPU9 718 aaKnown RBP8.97□□□□□ -0.97
SF3A1-207ENST00000471342 SLC35A3Q9Y2D2 325 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 ATRXP46100 2492 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 CNTRLQ7Z7A1 2325 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 HEATR5AQ86XA9 2040 aa8.97□□□□□ -0.97
SF3A1-207ENST00000471342 EML6Q6ZMW3 1958 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 C7orf72A4D263 438 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ANKUB1A6NFN9 424 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 hCG_2039718K7EN88 272 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 GSTA4O15217 222 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SNX4O95219 450 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 TP53P04637 393 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 RAP2AP10114 183 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 P2RX1P51575 399 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 CDH12P55289 794 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 GFRA1P56159 465 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SESN3P58005 492 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 PMP22Q01453 160 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 KCNC4Q03721 635 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 C17orf67Q0P5P2 114 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms