RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 TMEM31Q5JXX7 168 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TSSK4Q6SA08 328 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ACBD7Q8N6N7 88 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SLC35G3Q8N808 338 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 KDF1Q8NAX2 398 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 UBAC2Q8NBM4 344 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF582Q96NG8 517 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 MGLLQ99685 303 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 GNG12Q9UBI6 72 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 YIPF1Q9Y548 306 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 PCDHA9Q9Y5H5 950 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ANHXE9PGG2 379 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 HSD17B6O14756 317 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NRP1O14786 923 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SRPX2O60687 465 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 F2P00734 622 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 RNH1P13489 461 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 PORP16435 677 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ARSFP54793 590 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SORDQ00796 357 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CTSL3PQ5NE16 218 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CATSPEREQ5SY80 951 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CLVS2Q5SYC1 327 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF425Q6IV72 752 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CHADLQ6NUI6 762 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 IRF2BP2Q7Z5L9 587 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 MKXQ8IYA7 352 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SVBPQ8N300 66 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 CLDN19Q8N6F1 224 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM217Q8N7C4 229 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SEMA6DQ8NFY4 1073 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 APH1AQ96BI3 265 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SHARPINQ9H0F6 387 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 IKZF4Q9H2S9 585 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 DNAJB4Q9UDY4 337 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 RIPK3Q9Y572 518 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 KCTD3Q9Y597 815 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NHSL1Q5SYE7 1610 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ADAMTS13Q76LX8 1427 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 KDM4FA0A1W2PPD8 638 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PQL4 384 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PRV1 198 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 KLHL33A6NCF5 533 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NKX6-3A6NJ46 265 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 YJEFN3A6XGL0 299 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 B4GALT4O60513 344 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 RNGTTO60942 597 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 SORBS2O94875 1100 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF728P0DKX0 622 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 GGT1P19440 569 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 LAP3P28838 519 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TAGLN2P37802 199 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 HSF1Q00613 529 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 PNCKQ6P2M8 343 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 C19orf35Q6ZS72 473 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM130Q8N3G9 435 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 OR10G3Q8NGC4 313 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 OR5B3Q8NH48 314 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 HSD17B8Q92506 261 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ZMYND19Q96E35 227 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 FCRL5Q96RD9 977 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
BRCA1-210ENST00000471181 C11orf49Q9H6J7 331 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 NANOGQ9H9S0 305 aa6.51□□□□□ -1.37
BRCA1-210ENST00000471181 ITSN1Q15811 1721 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 A0A087WZY1 265 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 LOC102725191A0A1B0GVB3 256 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PP18 115 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 IRAK2O43187 625 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 USP2O75604 605 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 C4BPAP04003 597 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 HEXAP06865 529 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CSNK1A1P48729 337 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ATP1B3P54709 279 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 EMX2Q04743 252 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 IKZF1Q13422 519 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TNK1Q13470 666 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 GALEQ14376 348 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR4C11Q6IEV9 310 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 C22orf39Q6P5X5 142 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SBSNQ6UWP8 590 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF704Q6ZNC4 412 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 LRRC55Q6ZSA7 311 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC7A5P1Q8MH63 180 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TXNDC5Q8NBS9 432 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC41A2Q96JW4 573 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SAMD8Q96LT4 415 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 PRRT1Q99946 306 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CMSS1Q9BQ75 279 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 LINC00597Q9H2U6 94 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 IL26Q9NPH9 171 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC7A7Q9UM01 511 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 C1orf226A1L170 272 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR6C76A6NM76 312 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SOBPA7XYQ1 873 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CYTIPO60759 359 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ALDOAP04075 364 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms