RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 WDR45Q9Y484 360 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 SLC22A20A6NK97 555 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ETV2O00321 342 aaPredicted RBP12.73□□□□□ -0.37
TOP3B-215ENST00000470338 UBL4AP11441 157 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ADH6P28332 368 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ASCL1P50553 236 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ATP4BP51164 291 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 DLX5P56178 289 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 RPS3AP61247 264 aaKnown RBP12.73□□□□□ -0.37
TOP3B-215ENST00000470338 FOXF2Q12947 444 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 SKP2Q13309 424 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 FGFBP1Q14512 234 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 TOMM34Q15785 309 aaPredicted RBP12.73□□□□□ -0.37
TOP3B-215ENST00000470338 MAPK14Q16539 360 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 SYPL1Q16563 259 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 NDUFAF6Q330K2 333 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 GDF7Q7Z4P5 450 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 GRAMD2AQ8IUY3 354 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF619Q8N2I2 560 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 TOR1AIP2Q8NFQ8 470 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 OR5W2Q8NH69 310 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF524Q96C55 264 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 INTS12Q96CB8 462 aaKnown RBP12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ADGRG7Q96K78 797 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 TPT1P8Q9HAU6 139 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF175Q9Y473 711 aa12.73□□□□□ -0.37
TOP3B-215ENST00000470338 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
TOP3B-215ENST00000470338 ADAMDEC1O15204 470 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 SEC14L5O43304 696 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 EFNA2O43921 213 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 H6PDO95479 791 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 ANP32DO95626 131 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 NTN1O95631 604 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 NUDT14O95848 222 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 CSTAP01040 98 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 CRHP06850 196 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PRKCAP17252 672 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 ELK4P28324 431 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PGM1P36871 562 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 AGFG1P52594 562 aaKnown RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 CHRNEQ04844 493 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 CBFBQ13951 182 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 CTU2Q2VPK5 515 aaKnown RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 GPAT3Q53EU6 434 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 SLC25A53Q5H9E4 307 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 OR2A2Q6IF42 318 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 LRRC74BQ6ZQY2 392 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 EIF3MQ7L2H7 374 aaKnown RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 ANKFN1Q8N957 763 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 FAM71CQ8NEG0 241 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 FBXO27Q8NI29 283 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PNPT1Q8TCS8 783 aaKnown RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 SMPDL3BQ92485 455 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 FIG4Q92562 907 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PMM1Q92871 262 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF845Q96IR2 970 aaPredicted RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PINK1Q9BXM7 581 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PAIP1Q9H074 479 aaKnown RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 SLC38A1Q9H2H9 487 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 MTHFD2LQ9H903 347 aaPredicted RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 FOXD3Q9UJU5 478 aaPredicted RBP12.72□□□□□ -0.37
TOP3B-215ENST00000470338 SLC35A3Q9Y2D2 325 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PCDHB14Q9Y5E9 798 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 PDZD2O15018 2839 aa12.72□□□□□ -0.37
TOP3B-215ENST00000470338 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 EIF1AYO14602 144 aaKnown RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 TNFSF13O75888 250 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 CHRM4P08173 479 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 IL11P20809 199 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 SSTR2P30874 369 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 KCNJ10P78508 379 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 HPCAP84074 193 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 FOXF1Q12946 379 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 SQLEQ14534 574 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 MAPK11Q15759 364 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 SLC2A7Q6PXP3 512 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 ESPNLQ6ZVH7 1005 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 P4HA3Q7Z4N8 544 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 GCNT2Q8N0V5 402 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 LILRA2Q8N149 483 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 RFWD2Q8NHY2 731 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 RNASE6Q93091 150 aaKnown RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 SPDL1Q96EA4 605 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 LRRC46Q96FV0 321 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 THOC1Q96FV9 657 aaKnown RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 MRGPRX4Q96LA9 322 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 THUMPD3Q9BV44 507 aaKnown RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 RNF122Q9H9V4 155 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms