RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ARGFXA6NJG6 315 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FAM220BPB1ANY3 271 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 WWP2O00308 870 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ASNA1O43681 348 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 BCAS2O75934 225 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 DNAJB5O75953 348 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 OR2J2O76002 312 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 KCNK2O95069 426 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NADKO95544 446 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 MT-ND1P03886 318 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 BCHEP06276 602 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ALOX5P09917 674 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 DRD5P21918 477 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ME2P23368 584 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ITPKBP27987 946 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HTR1EP28566 365 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 AQP1P29972 269 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PEX19P40855 299 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PPICP45877 212 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PRIM2P49643 509 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CLCN2P51788 898 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NR0B1P51843 470 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CDK6Q00534 326 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TLE3Q04726 772 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CDC20Q12834 499 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TRIM25Q14258 630 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TAF11Q15544 211 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 EXT1Q16394 746 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CYP51A1Q16850 503 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SAMD4BQ5PRF9 694 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 GCNT6Q5T4J0 391 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 C6orf163Q5TEZ5 329 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 MBNL2Q5VZF2 373 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 H3F3CQ6NXT2 135 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ZCCHC12Q6PEW1 402 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SPATA24Q86W54 205 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 RAB43Q86YS6 212 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 MICU2Q8IYU8 434 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PRR22Q8IZ63 422 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 STPG3Q8N7X2 389 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CHDHQ8NE62 594 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 OR8K3Q8NH51 312 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NFKBIDQ8NI38 313 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NUBPLQ8TB37 319 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 M1APQ8TC57 530 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 BRIX1Q8TDN6 353 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 GPR151Q8TDV0 419 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HSPBAP1Q96EW2 488 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 RMND5BQ96G75 393 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TMEM19Q96HH6 336 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 REXO5Q96IC2 774 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 LCORQ96JN0 433 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FAM210AQ96ND0 272 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 STACQ99469 402 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SDF2Q99470 211 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PKP2Q99959 881 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 KCTD14Q9BQ13 255 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TREX2Q9BQ50 279 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 DPH1Q9BZG8 443 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SLC38A1Q9H2H9 487 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 GIN1Q9NXP7 522 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FLRT3Q9NZU0 649 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 COPS7AQ9UBW8 275 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PRODH2Q9UF12 536 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 MKLN1Q9UL63 735 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NUP214P35658 2090 aaPredicted RBP4.34□□□□□ -1.72
SF3B1-208ENST00000470268 CROCCQ5TZA2 2017 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 DSPPQ9NZW4 1301 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 NPIPA5A0A0B4J1W7 369 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 FRG2CA6NGY1 282 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 DUXAA6NLW8 204 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OR6C76A6NM76 312 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 C17orf51A8MQB3 221 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 NPIPA7E9PJI5 369 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 PEX12O00623 359 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ADAM10O14672 748 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ARPC2O15144 300 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZFAND5O76080 213 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 PGM3O95394 542 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 H6PDO95479 791 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 KNG1P01042 644 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ALPPP05187 535 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 SERPINA7P05543 415 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 NPIPA8P0DM63 369 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 PF4V1P10720 104 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 GGT1P19440 569 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ABCD3P28288 659 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 PIGAP37287 484 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 VHLP40337 213 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RFX3P48380 749 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 KHKP50053 298 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 AQP4P55087 323 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 AP2B1P63010 937 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CD83Q01151 205 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RAPSNQ13702 412 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 SCARB2Q14108 478 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 GK3PQ14409 553 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 MAPK14Q16539 360 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ARHGAP11BQ3KRB8 267 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms