RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 RNASET2O00584 256 aaKnown RBP14.57□□□□□ -0.08
COL9A3-208ENST00000469802 ANKRD28O15084 1053 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 CFLARO15519 480 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 SCN2BO60939 215 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 SYNGR4O95473 234 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 OPN1LWP04000 364 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 PRKCAP17252 672 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 AGTR1P30556 359 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 SOAT1P35610 550 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 KCNJ5P48544 419 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 RNF144AP50876 292 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-208ENST00000469802 RPS26P62854 115 aaKnown RBP14.57□□□□□ -0.08
COL9A3-208ENST00000469802 MPP2Q14168 576 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 TOMM34Q15785 309 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-208ENST00000469802 NDUFAF6Q330K2 333 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 OR4F3Q6IEY1 312 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 PPP4R4Q6NUP7 873 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 BHLHB9Q6PI77 547 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 WFDC11Q8NEX6 87 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 MIPOL1Q8TD10 442 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 GPR119Q8TDV5 335 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF524Q96C55 264 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 ARSGQ96EG1 525 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 HS3ST6Q96QI5 342 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 PARD6BQ9BYG5 372 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 COQ10BQ9H8M1 238 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 RAB21Q9UL25 225 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 CARD8Q9Y2G2 431 aa14.57□□□□□ -0.08
COL9A3-208ENST00000469802 RNF103-CHMP3A0A140T963 221 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 WDR91A4D1P6 747 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 ESPNB1AK53 854 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 H3BNH8 94 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 DNAJA2O60884 412 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 AK1P00568 194 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 PLGP00747 810 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-208ENST00000469802 THBDP07204 575 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 MYZAPP0CAP1 466 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 FOSL1P15407 271 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 SFTPDP35247 375 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 CTBP2P56545 445 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 PGS1Q32NB8 556 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 SLC25A53Q5H9E4 307 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 PDSS1Q5T2R2 415 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 STAC2Q6ZMT1 411 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 LRRC34Q8IZ02 419 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 FBXO27Q8NI29 283 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 CPNE4Q96A23 557 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-208ENST00000469802 TESCQ96BS2 214 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 PIK3IP1Q96FE7 263 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 MRGPRX4Q96LA9 322 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 PPP1R36Q96LQ0 422 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 SRXN1Q9BYN0 137 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF350Q9GZX5 532 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 KCNE5Q9UJ90 142 aa14.56□□□□□ -0.08
COL9A3-208ENST00000469802 ROS1P08922 2347 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 NIPBLQ6KC79 2804 aaeCLIP14.55□□□□□ -0.08
COL9A3-208ENST00000469802 CENPVL1A0A0U1RR11 272 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF195O14628 629 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF264O43296 627 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF500O60304 480 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-208ENST00000469802 EIF4E2O60573 245 aaKnown RBP14.55□□□□□ -0.08
COL9A3-208ENST00000469802 TUBBP07437 444 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 UBL4AP11441 157 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 PPP3CBP16298 524 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 SLC1A6P48664 564 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 RPL14P50914 215 aaKnown RBP14.55□□□□□ -0.08
COL9A3-208ENST00000469802 CARD18P57730 90 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 PHC1P78364 1004 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 SKP2Q13309 424 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF141Q15928 474 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 EXOC3L2Q2M3D2 409 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 PDZK1Q5T2W1 519 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 HEPHL1Q6MZM0 1159 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 C6orf120Q7Z4R8 191 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 KIRREL3Q8IZU9 778 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 CLEC4FQ8N1N0 589 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 TOR1AIP2Q8NFQ8 470 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 OR5W2Q8NH69 310 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 ABHD3Q8WU67 409 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 OSTF1Q92882 214 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 ZC3HAV1LQ96H79 300 aaKnown RBP14.55□□□□□ -0.08
COL9A3-208ENST00000469802 SLC35G5Q96KT7 338 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 PIP5K1AQ99755 562 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 KLHL4Q9C0H6 718 aa14.55□□□□□ -0.08
COL9A3-208ENST00000469802 NSD1Q96L73 2696 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-208ENST00000469802 SERINC4A6NH21 518 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 DUXAA6NLW8 204 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 GJE1A6NN92 205 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 FCMRO60667 390 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 DIAPH2O60879 1101 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 NUDT14O95848 222 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 GUSBP08236 651 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 BGNP21810 368 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 MATN1P21941 496 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 SELENBP1Q13228 472 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 ARHGAP11BQ3KRB8 267 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 KRTAP21-3Q3LHN1 58 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 AP1ARQ63HQ0 302 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 OGFOD2Q6N063 350 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 ZNF614Q8N883 585 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms