RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 BLOC1S6Q9UL45 172 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 PCDHGA3Q9Y5H0 932 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 NPFFR2Q9Y5X5 522 aa17.42■□□□□ 0.38
SMC4-209ENST00000468653 A0A0B4J2E0 115 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 A0A1B0GX12 115 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 A0A1W2PNU3 283 aaPredicted RBP17.41■□□□□ 0.38
SMC4-209ENST00000468653 C9orf172C9J069 976 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 WWP2O00308 870 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 ZNF264O43296 627 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 CHP2O43745 196 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 ANGPTL1O95841 491 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 DLGAP3O95886 979 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 LINGO3P0C6S8 592 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 TCN2P20062 427 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 PTNP21246 168 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 OMPP47874 163 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 CDC42P60953 191 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 TSPAN31Q12999 210 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 PCOLCEQ15113 449 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 BTBD16Q32M84 506 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 WDR88Q6ZMY6 472 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 TIPARPQ7Z3E1 657 aaKnown RBP17.41■□□□□ 0.38
SMC4-209ENST00000468653 ENTHD1Q8IYW4 607 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 RNF113BQ8IZP6 322 aaKnown RBP17.41■□□□□ 0.38
SMC4-209ENST00000468653 TMCO5AQ8N6Q1 288 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 BPIFB6Q8NFQ5 453 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 TBL1XR1Q9BZK7 514 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 ZNF700Q9H0M5 742 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 AASSQ9UDR5 926 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 RNF6Q9Y252 685 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 CARD8Q9Y2G2 431 aa17.41■□□□□ 0.38
SMC4-209ENST00000468653 IGHV1-45A0A0A0MS14 117 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 TRIM64A6NGJ6 449 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 OR6C70A6NIJ9 312 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 PIP5K1CO60331 668 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 IGHEP01854 428 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 NGFRP08138 427 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 IGFBP1P08833 259 aaPredicted RBP17.4■□□□□ 0.38
SMC4-209ENST00000468653 CRHBPP24387 322 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 FMO3P31513 532 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 HLCSP50747 726 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 CCR4P51679 360 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 ALG10BQ5I7T1 473 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 LAIR2Q6ISS4 152 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 FAM71CQ8NEG0 241 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 CT55Q8WUE5 264 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 HS6ST2Q96MM7 605 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 DEFB126Q9BYW3 111 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 EXOSC3Q9NQT5 275 aaKnown RBP17.4■□□□□ 0.38
SMC4-209ENST00000468653 TUBA8Q9NY65 449 aaPredicted RBP17.4■□□□□ 0.38
SMC4-209ENST00000468653 HS3ST3B1Q9Y662 390 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 PCNX2A6NKB5 2137 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 A0A1W2PQD3 144 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 SLC1A7O00341 560 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 NDUFB5O43674 189 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 PPM1BO75688 479 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 GPR4P46093 362 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 RPL5P46777 297 aaKnown RBP17.4■□□□□ 0.38
SMC4-209ENST00000468653 TUBA4AP68366 448 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 SKP2Q13309 424 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 EFR3AQ14156 821 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 ULK3Q6PHR2 472 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 MARCH3Q86UD3 253 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 MPP4Q96JB8 637 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 PHOX2BQ99453 314 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 FOXJ2Q9P0K8 574 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 MED31Q9Y3C7 131 aa17.4■□□□□ 0.38
SMC4-209ENST00000468653 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.39■□□□□ 0.37
SMC4-209ENST00000468653 ALG1L2C9J202 215 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 OIP5O43482 229 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 TP53P04637 393 aaPredicted RBP17.39■□□□□ 0.37
SMC4-209ENST00000468653 TFAP2AP05549 437 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 RAB40ALP0C0E4 278 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 CCDC159P0C7I6 412 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 ENDOUP21128 410 aaKnown RBP17.39■□□□□ 0.37
SMC4-209ENST00000468653 FPR3P25089 353 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 EXT1Q16394 746 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 KIRREL2Q6UWL6 708 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 RASSF6Q6ZTQ3 369 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 CDK20Q8IZL9 346 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 POGLUT1Q8NBL1 392 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 SPRY4Q9C004 299 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 LAT2Q9GZY6 243 aa17.39■□□□□ 0.37
SMC4-209ENST00000468653 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
SMC4-209ENST00000468653 TMEM200CA6NKL6 621 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 KPNA4O00629 521 aaPredicted RBP17.38■□□□□ 0.37
SMC4-209ENST00000468653 OR6B1O95007 311 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 COX6A1P12074 109 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 EVI2BP34910 448 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 STAT5AP42229 794 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 NR1H2P55055 460 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 CXCR4P61073 352 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 SLX4IPQ5VYV7 408 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 CBLN3Q6UW01 205 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 P3H2Q8IVL5 708 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 OR5M3Q8NGP4 307 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 PFN4Q8NHR9 129 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 RHOXF1Q8NHV9 184 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 ELP5Q8TE02 316 aa17.38■□□□□ 0.37
SMC4-209ENST00000468653 DNAJA4Q8WW22 397 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms