RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 IL32P24001 234 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 ADH6P28332 368 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 AGTR1P30556 359 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 HPCAP84074 193 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 CAPRIN1Q14444 709 aaKnown RBP15.67■□□□□ 0.1
COL7A1-206ENST00000466591 GPR68Q15743 365 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 CHI3L2Q15782 390 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 TMEM176BQ3YBM2 270 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-206ENST00000466591 PLEKHM3Q6ZWE6 761 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 OR5D16Q8NGK9 328 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 COQ8BQ96D53 544 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 PIP5K1AQ99755 562 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 NGBQ9NPG2 151 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 SERINC1Q9NRX5 453 aa15.67■□□□□ 0.1
COL7A1-206ENST00000466591 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 ZNF264O43296 627 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 PRKD3O94806 890 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 CPSF4O95639 269 aaKnown RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 AK1P00568 194 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 HOXC12P31275 282 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 RPS26P62854 115 aaKnown RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 HBA1P69905 142 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 EMX2Q04743 252 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 SELENBP1Q13228 472 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 ZNF239Q16600 458 aaKnown RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 CTU2Q2VPK5 515 aaKnown RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 NDUFAF6Q330K2 333 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 CBLN3Q6UW01 205 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 CLEC9AQ6UXN8 241 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 Q71RC1 249 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 FCRLAQ7L513 359 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 KIRREL3Q8IZU9 778 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 LRRC75A-AS1Q8N1F1 130 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 STEAP2Q8NFT2 490 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 POC1BQ8TC44 478 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 ZFP90Q8TF47 636 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 AENQ8WTP8 325 aaKnown RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 ABHD3Q8WU67 409 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 TMEM171Q8WVE6 324 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 ADGRG7Q96K78 797 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 MRGPRX4Q96LA9 322 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 NPAS1Q99742 590 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 PAIP2Q9BPZ3 127 aaKnown RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 KCNK9Q9NPC2 374 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 GPATCH2Q9NW75 528 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 GPR52Q9Y2T5 361 aa15.66■□□□□ 0.1
COL7A1-206ENST00000466591 V9GYY5 206 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-206ENST00000466591 SIAH2O43255 324 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 STX11O75558 287 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 AGR2O95994 175 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 SERPINE1P05121 402 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 CREB1P16220 341 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 IL11P20809 199 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 PSMA4P25789 261 aaKnown RBP15.65■□□□□ 0.1
COL7A1-206ENST00000466591 CHI3L1P36222 383 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-206ENST00000466591 CLDN8P56748 225 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 ABCE1P61221 599 aaKnown RBP15.65■□□□□ 0.1
COL7A1-206ENST00000466591 GUSBP1Q15486 140 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 KLHL26Q53HC5 615 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 PDZK1Q5T2W1 519 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 ANXA8L1Q5VT79 327 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 OR4F3Q6IEY1 312 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 STAC2Q6ZMT1 411 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 ZNF704Q6ZNC4 412 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-206ENST00000466591 C6orf120Q7Z4R8 191 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 YTHDF3Q7Z739 585 aaKnown RBP15.65■□□□□ 0.1
COL7A1-206ENST00000466591 OR5W2Q8NH69 310 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 PSMA8Q8TAA3 256 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 TMEM234Q8WY98 164 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 PLPPR2Q96GM1 343 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 POM121Q96HA1 1249 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 Q96MF0 132 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 HS3ST6Q96QI5 342 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 HDHD5Q9BXW7 423 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 CXorf56Q9H5V9 222 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 KLHL9Q9P2J3 617 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 KLHL13Q9P2N7 655 aa15.65■□□□□ 0.1
COL7A1-206ENST00000466591 SERINC4A6NH21 518 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 SMAD7O15105 426 aaKnown RBP15.64■□□□□ 0.09
COL7A1-206ENST00000466591 EIF4E2O60573 245 aaKnown RBP15.64■□□□□ 0.09
COL7A1-206ENST00000466591 SNUPNO95149 360 aaKnown RBP15.64■□□□□ 0.09
COL7A1-206ENST00000466591 CSTAP01040 98 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 PRKCAP17252 672 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 QPRTQ15274 297 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 C3orf33Q6P1S2 294 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 CXorf67Q86X51 503 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-206ENST00000466591 CLECL1Q8IZS7 167 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 SLC43A2Q8N370 569 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 ZNF781Q8N8C0 355 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 ZNF563Q8TA94 476 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 RNF128Q8TEB7 428 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 NUDT8Q8WV74 236 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 ZIM3Q96PE6 472 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 OR5B2Q96R09 309 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 BDH2Q9BUT1 245 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 DLL4Q9NR61 685 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 ICAM5Q9UMF0 924 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 RAP2CQ9Y3L5 183 aa15.64■□□□□ 0.09
COL7A1-206ENST00000466591 ACTL7BQ9Y614 415 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms