RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 TRIM2Q9C040 744 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 C12orf65Q9H3J6 166 aaKnown RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 TUBB1Q9H4B7 451 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 COQ10BQ9H8M1 238 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 DUSP22Q9NRW4 184 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 SIRT3Q9NTG7 399 aaPredicted RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 GIN1Q9NXP7 522 aa16.71■□□□□ 0.27
SRSF4-202ENST00000466448 SONP18583 2426 aaKnown RBP16.71■□□□□ 0.27
SRSF4-202ENST00000466448 GJE1A6NN92 205 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 KIF2AO00139 706 aaPredicted RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 NUDT14O95848 222 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 YES1P07947 543 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 ENPP1P22413 925 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 ITGADQ13349 1161 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 TOMM34Q15785 309 aaPredicted RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 TMEM176BQ3YBM2 270 aaPredicted RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 CCDC153Q494R4 210 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 KLHL26Q53HC5 615 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 HMBOX1Q6NT76 420 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 LRIG3Q6UXM1 1119 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 DNAJC14Q6Y2X3 702 aaPredicted RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 MTERF4Q7Z6M4 381 aaKnown RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 TDRPQ86YL5 185 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 CHMP6Q96FZ7 201 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 STACQ99469 402 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 PIGUQ9H490 435 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 ZCCHC3Q9NUD5 404 aaKnown RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 ING1Q9UK53 422 aaPredicted RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 CARD8Q9Y2G2 431 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 FIS1Q9Y3D6 152 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 ACTL7BQ9Y614 415 aa16.7■□□□□ 0.26
SRSF4-202ENST00000466448 GPC6Q9Y625 555 aaPredicted RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 ANK3Q12955 4377 aaKnown RBP16.7■□□□□ 0.26
SRSF4-202ENST00000466448 IGHV3-15A0A0B4J1V0 119 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 NPIPA5A0A0B4J1W7 369 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 DPRXA6NFQ7 191 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 NPIPA7E9PJI5 369 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 AZIN1O14977 448 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 LSM1O15116 133 aaKnown RBP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 TLX2O43763 284 aaPredicted RBP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 CD5LO43866 347 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 ADAM11O75078 769 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 CD8AP01732 235 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 FAM153BP0C7A2 387 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 LINC00032P0C843 101 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 NPIPA8P0DM63 369 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 CPA3P15088 417 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 P2RX1P51575 399 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 LASP1Q14847 261 aaKnown RBP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 FAM153CQ494X1 144 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 BHLHA15Q7RTS1 189 aaPredicted RBP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 ZNF527Q8NB42 609 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 ATP6V1C2Q8NEY4 427 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 ZFP90Q8TF47 636 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 ZNF524Q96C55 264 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 MTERF3Q96E29 417 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 TRAF4Q9BUZ4 470 aaPredicted RBP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 TXLNGYQ9BZA5 131 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 CXorf36Q9H7Y0 433 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 YAE1D1Q9NRH1 226 aa16.69■□□□□ 0.26
SRSF4-202ENST00000466448 GDF2Q9UK05 429 aaPredicted RBP16.69■□□□□ 0.26
SRSF4-202ENST00000466448 RAMP1O60894 148 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 NEFHP12036 1026 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 PRKCAP17252 672 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 ATP6V1C1P21283 382 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 SUMO3P55854 103 aaPredicted RBP16.68■□□□□ 0.26
SRSF4-202ENST00000466448 MLC1Q15049 377 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 NDUFAF6Q330K2 333 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 GALNTL6Q49A17 601 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 LIPMQ5VYY2 423 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 RNF165Q6ZSG1 346 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 Q6ZT83 130 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 HIPK1Q86Z02 1210 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 CNPY4Q8N129 248 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 SLC43A2Q8N370 569 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 CCDC63Q8NA47 563 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 GPR119Q8TDV5 335 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 USB1Q9BQ65 265 aaKnown RBP16.68■□□□□ 0.26
SRSF4-202ENST00000466448 PSD2Q9BQI7 771 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 ANKZF1Q9H8Y5 726 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 BCO1Q9HAY6 547 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 CISD1Q9NZ45 108 aaKnown RBP16.68■□□□□ 0.26
SRSF4-202ENST00000466448 PRSS50Q9UI38 385 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 TMED5Q9Y3A6 229 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 DNAJC15Q9Y5T4 150 aa16.68■□□□□ 0.26
SRSF4-202ENST00000466448 A0A1W2PNR3 127 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 RNF212BA8MTL3 300 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 LYZL6O75951 148 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 BCKDHAP12694 445 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 EDNRAP25101 427 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 CRHR1P34998 444 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 ASMTP46597 345 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 OR3A2P47893 321 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 CCT5P48643 541 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 STK11Q15831 433 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 DCST2Q5T1A1 773 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 KANK2Q63ZY3 851 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 CDC73Q6P1J9 531 aa16.67■□□□□ 0.26
SRSF4-202ENST00000466448 R3HCC1LQ7Z5L2 792 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms