RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 MARVELD2Q8N4S9 558 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 OR5W2Q8NH69 310 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 NFKBIDQ8NI38 313 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 RP9Q8TA86 221 aaKnown RBP11.2□□□□□ -0.62
CHPF2-202ENST00000465601 GPR119Q8TDV5 335 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF524Q96C55 264 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 LRRC58Q96CX6 371 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 RCN3Q96D15 328 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 PIGQQ9BRB3 760 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 SLC39A3Q9BRY0 314 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 MYLK2Q9H1R3 596 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 SLC35A3Q9Y2D2 325 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
CHPF2-202ENST00000465601 A0A0G2JPF8 293 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 HNRNPCL2B2RXH8 293 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 HNRNPCL3B7ZW38 293 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 C5orf58C9J3I9 102 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 H3BML4 177 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 FXYD1O00168 92 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 HNRNPCL1O60812 293 aaKnown RBP11.19□□□□□ -0.62
CHPF2-202ENST00000465601 PGM3O95394 542 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 DBIP07108 87 aaKnown RBP11.19□□□□□ -0.62
CHPF2-202ENST00000465601 LINGO3P0C6S8 592 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 HNRNPCL4P0DMR1 293 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 COX4I1P13073 169 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 GABRA1P14867 456 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 CPN1P15169 458 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 IL7RP16871 459 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 RPS4Y1P22090 263 aaKnown RBP11.19□□□□□ -0.62
CHPF2-202ENST00000465601 SUMO3P55854 103 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-202ENST00000465601 CDK6Q00534 326 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 PMPCAQ10713 525 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 SKP2Q13309 424 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 GNA13Q14344 377 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 ADRM1Q16186 407 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 TMEM44Q2T9K0 475 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 C1orf185Q5T7R7 199 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 TMEM211Q6ICI0 200 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 NANOGP8Q6NSW7 305 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 MTFR2Q6P444 385 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 RPTNQ6XPR3 784 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 VRK2Q86Y07 508 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 PM20D2Q8IYS1 436 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 PCYOX1LQ8NBM8 494 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 TOR1AIP2Q8NFQ8 470 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 OR52P1PQ8NH57 321 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 POC1BQ8TC44 478 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 WDR60Q8WVS4 1066 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 OIT3Q8WWZ8 545 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 SMPDL3BQ92485 455 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 CNOT9Q92600 299 aaKnown RBP11.19□□□□□ -0.62
CHPF2-202ENST00000465601 PMM1Q92871 262 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 PRDM14Q9GZV8 571 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 NANOGQ9H9S0 305 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 BCL2L10Q9HD36 194 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 ARL2BPQ9Y2Y0 163 aa11.19□□□□□ -0.62
CHPF2-202ENST00000465601 DSPPQ9NZW4 1301 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 KDM4EB2RXH2 506 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 H0Y3Z8 333 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 H0YC42 278 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 AIM2O14862 343 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 NPPAP01160 153 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 OPN1LWP04000 364 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 HOXD4P09016 255 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 GLI4P10075 376 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PEPDP12955 493 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 NID1P14543 1247 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 ZNF708P17019 499 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 POU3F2P20265 443 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 SLC6A2P23975 617 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 RYKP34925 604 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 SUCLG1P53597 346 aaKnown RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 TPD52P55327 224 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 CLDN18P56856 261 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 NUP107P57740 925 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PLAURQ03405 335 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 FOXF1Q12946 379 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 CBFBQ13951 182 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 SCARB2Q14108 478 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 QPRTQ15274 297 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 CYP51A1Q16850 503 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 ACSF3Q4G176 576 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 RABL3Q5HYI8 236 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 MRPL2Q5T653 305 aaKnown RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PRAMEF8Q5VWM4 474 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PRAMEF7Q5VXH5 474 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 REEP3Q6NUK4 255 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 B3GNT6Q6ZMB0 384 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PTOV1Q86YD1 416 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 UBQLNLQ8IYU4 475 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 GTPBP8Q8N3Z3 284 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-202ENST00000465601 METTL25Q8N6Q8 603 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 FAM71CQ8NEG0 241 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 OR10Q1Q8NGQ4 319 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 OR10A6Q8NH74 314 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 FBXO27Q8NI29 283 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 BBS10Q8TAM1 723 aa11.18□□□□□ -0.62
CHPF2-202ENST00000465601 PHF10Q8WUB8 498 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms