RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 NET1Q7Z628 596 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 ARMC8Q8IUR7 673 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 SLC15A3Q8IY34 581 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 OR5W2Q8NH69 310 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 CNOT9Q92600 299 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 REXO5Q96IC2 774 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 KCTD14Q9BQ13 255 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 PIGQQ9BRB3 760 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 GPATCH1Q9BRR8 931 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 SPAG4Q9NPE6 437 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 MED17Q9NVC6 651 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 CMTM6Q9NX76 183 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 SPRR3Q9UBC9 169 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 USP22Q9UPT9 525 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 FREM3P0C091 2139 aa16.79■□□□□ 0.28
SCAMP3-204ENST00000465312 ZGRF1Q86YA3 2104 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 A0A087WZY1 265 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 BCKDKO14874 412 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 THBS1P07996 1170 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 POU3F2P20265 443 aaPredicted RBP16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 CALB2P22676 271 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 PGM1P36871 562 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 ADH7P40394 386 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 SRYQ05066 204 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 C3AR1Q16581 482 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 LRRC23Q53EV4 343 aaPredicted RBP16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 POMZP3Q6PJE2 187 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 PATL1Q86TB9 770 aaKnown RBP16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 UBQLNLQ8IYU4 475 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 FAM57AQ8TBR7 257 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 ZBTB8AQ96BR9 441 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 ALG2Q9H553 416 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 PLSCR2Q9NRY7 297 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 RLIMQ9NVW2 624 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 KLHL28Q9NXS3 571 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 TINAGQ9UJW2 476 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 ICAM5Q9UMF0 924 aa16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 GPC6Q9Y625 555 aaPredicted RBP16.78■□□□□ 0.28
SCAMP3-204ENST00000465312 ZNF407Q9C0G0 2248 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 A0A1B0GVC2 190 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 ELOVL7A1L3X0 281 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 OR14I1A6ND48 311 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 B2RBV5 119 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 NME4O00746 187 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 SEC14L5O43304 696 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 ZIC3O60481 467 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 BCAS1O75363 584 aaPredicted RBP16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 WISP1O95388 367 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 LINGO3P0C6S8 592 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 GKN3PP0CG01 181 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 BMP7P18075 431 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 ME2P23368 584 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 SLC6A8P48029 635 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 NCALDP61601 193 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 CBX1P83916 185 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 FOXF1Q12946 379 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 QPRTQ15274 297 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 PLPPR5Q32ZL2 321 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 RNF220Q5VTB9 566 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 C3P1Q6ZMU1 363 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 CALHM3Q86XJ0 350 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 ZNF440Q8IYI8 595 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 MICU2Q8IYU8 434 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 DEFB107AQ8IZN7 70 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 SMYD1Q8NB12 490 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 FIG4Q92562 907 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 RNF145Q96MT1 663 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 ZNF583Q96ND8 569 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 UGT2B28Q9BY64 529 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 PNPLA3Q9NST1 481 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 DNAJB12Q9NXW2 375 aaKnown RBP16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 STOML1Q9UBI4 398 aa16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 MRPS18CQ9Y3D5 142 aaKnown RBP16.77■□□□□ 0.28
SCAMP3-204ENST00000465312 NBASA2RRP1 2371 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 OR2M5A3KFT3 312 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 CDHR4A6H8M9 788 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 CFAP73A6NFT4 308 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 FIGNL2A6NMB9 653 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 H0Y3Z8 333 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 M0QX08 132 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 GMNNO75496 209 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 ACTL6AO96019 429 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 GP1BBP13224 206 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 TCN1P20061 433 aaPredicted RBP16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 STARP49675 285 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 GZMMP51124 257 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 COPZ1P61923 177 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 EEF1A1P68104 462 aaKnown RBP16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 TOMM34Q15785 309 aaPredicted RBP16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 ZSWIM7Q19AV6 140 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 FGD2Q7Z6J4 655 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 FJX1Q86VR8 437 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 PGAM4Q8N0Y7 254 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 CADM2Q8N3J6 435 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 RNF148Q8N7C7 305 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 ATP6V1C2Q8NEY4 427 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 TNIP2Q8NFZ5 429 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 FBXO27Q8NI29 283 aa16.76■□□□□ 0.27
SCAMP3-204ENST00000465312 GPR119Q8TDV5 335 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms