RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 KCNE5Q9UJ90 142 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 CARD8Q9Y2G2 431 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 AP3M1Q9Y2T2 418 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 ZNF337Q9Y3M9 751 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 DTNAQ9Y4J8 743 aa15.41■□□□□ 0.06
VPS52-215ENST00000464425 A0A0G2JNJ9 132 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 CENPVL1A0A0U1RR11 272 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 OR2M5A3KFT3 312 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 EPPINO95925 133 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 TFPTP0C1Z6 253 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 POU3F2P20265 443 aaPredicted RBP15.4■□□□□ 0.06
VPS52-215ENST00000464425 SLC6A2P23975 617 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 NUDT2P50583 147 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 CLDN18P56856 261 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 CBX1P83916 185 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 ZNF117Q03924 483 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 GNA13Q14344 377 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 SF3B4Q15427 424 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■■■■■ 29.7
VPS52-215ENST00000464425 ZNF630Q2M218 657 aaPredicted RBP15.4■□□□□ 0.06
VPS52-215ENST00000464425 SP5Q6BEB4 398 aaPredicted RBP15.4■□□□□ 0.06
VPS52-215ENST00000464425 TYW3Q6IPR3 259 aaKnown RBP15.4■□□□□ 0.06
VPS52-215ENST00000464425 CBLN3Q6UW01 205 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 ARPINQ7Z6K5 226 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 SERPINA11Q86U17 422 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 UBQLNLQ8IYU4 475 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 METTL25Q8N6Q8 603 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 ANKFN1Q8N957 763 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 TUBA1CQ9BQE3 449 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 PIGQQ9BRB3 760 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 SLC39A3Q9BRY0 314 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 UCK2Q9BZX2 261 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 SAP130Q9H0E3 1048 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 HHATLQ9HCP6 504 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 A4GALTQ9NPC4 353 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 P2RX2Q9UBL9 471 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 Q9UFV3 132 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 WDR45Q9Y484 360 aa15.4■□□□□ 0.06
VPS52-215ENST00000464425 KLF2Q9Y5W3 355 aaPredicted RBP15.4■□□□□ 0.06
VPS52-215ENST00000464425 PHF3Q92576 2039 aaKnown RBP15.39■□□□□ 0.05
VPS52-215ENST00000464425 TMEM247A6NEH6 219 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 SERINC4A6NH21 518 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 CCT8L1PA6NM43 557 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 FAM90A27PA6NNH2 459 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 FAM47E-STBD1D6RA91 191 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 H3BML4 177 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 UGT2B17O75795 530 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 TOXO94900 526 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 H6PDO95479 791 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 CALB2P22676 271 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 CHRNB4P30926 498 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 ZNF41P51814 821 aaPredicted RBP15.39■□□□□ 0.05
VPS52-215ENST00000464425 MTPNP58546 118 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 CHRNEQ04844 493 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 ZNF141Q15928 474 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 SYPL1Q16563 259 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 GLYR1Q49A26 553 aaPredicted RBP15.39■□□□□ 0.05
VPS52-215ENST00000464425 PLXDC2Q6UX71 529 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 LRRC74BQ6ZQY2 392 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 TNIP2Q8NFZ5 429 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 LILRB4Q8NHJ6 448 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 ZPLD1Q8TCW7 415 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 SLC38A5Q8WUX1 472 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 ASB5Q8WWX0 329 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 OIT3Q8WWZ8 545 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 SMPDL3BQ92485 455 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 ZG16BQ96DA0 208 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 NPAS1Q99742 590 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 SPATA9Q9BWV2 254 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 TMEM38AQ9H6F2 299 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 MED17Q9NVC6 651 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 CALML5Q9NZT1 146 aa15.39■□□□□ 0.05
VPS52-215ENST00000464425 A0A087WZY1 265 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 H0YC42 278 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 KIAA0513O60268 411 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 CYP7B1O75881 506 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 NUDT14O95848 222 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 T-ENOLP0DO92 83 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 NR2F1P10589 423 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 PEPDP12955 493 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 ZNF708P17019 499 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 GZMMP51124 257 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 SUCLG1P53597 346 aaKnown RBP15.38■□□□□ 0.05
VPS52-215ENST00000464425 TPD52P55327 224 aaPredicted RBP15.38■□□□□ 0.05
VPS52-215ENST00000464425 HPCAP84074 193 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 SELPLGQ14242 412 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 MAPK11Q15759 364 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 ADRM1Q16186 407 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 MAPK14Q16539 360 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 TMEM44Q2T9K0 475 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 RABL3Q5HYI8 236 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 GCNT6Q5T4J0 391 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 RIPPLY2Q5TAB7 128 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 PRAMEF8Q5VWM4 474 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 PRAMEF7Q5VXH5 474 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 NSUN5P2Q63ZY6 315 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 ZNF787Q6DD87 383 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 FRRS1Q6ZNA5 592 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 NET1Q7Z628 596 aaPredicted RBP15.38■□□□□ 0.05
VPS52-215ENST00000464425 LACC1Q8IV20 430 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 ZNF619Q8N2I2 560 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms