RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PSMB1P20618 241 aaKnown RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 AGTR1P30556 359 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 CLDN8P56748 225 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 HBA1P69905 142 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 FOXF1Q12946 379 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 RNPS1Q15287 305 aaKnown RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 BEX5Q5H9J7 111 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 ANKRD34AQ69YU3 496 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 NUDCD3Q8IVD9 361 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 FBXO27Q8NI29 283 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 GPR119Q8TDV5 335 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 RNF128Q8TEB7 428 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 ARSGQ96EG1 525 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 ZC3HAV1LQ96H79 300 aaKnown RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 REXO5Q96IC2 774 aaKnown RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 MRGPRX4Q96LA9 322 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 OR7D2Q96RA2 312 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 NMUR2Q9GZQ4 415 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 TMEM185BQ9H7F4 350 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 UBTD1Q9HAC8 227 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 CARD8Q9Y2G2 431 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 DTNAQ9Y4J8 743 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 KCNE3Q9Y6H6 103 aa12.83□□□□□ -0.36
SNRNP40-203ENST00000463988 GTPBP1O00178 669 aaKnown RBP12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 ETV2O00321 342 aaPredicted RBP12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 CFLARO15519 480 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 OIP5O43482 229 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 EFNA2O43921 213 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 TMCC2O75069 709 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 SNUPNO95149 360 aaKnown RBP12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 NTN1O95631 604 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 NUDT14O95848 222 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 AK1P00568 194 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 INHBBP09529 407 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 G6PDP11413 515 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 SFTPDP35247 375 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 NR1H2P55055 460 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF239Q16600 458 aaKnown RBP12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 SLC25A53Q5H9E4 307 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 P3H2Q8IVL5 708 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 MREGQ8N565 214 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 TOR1AIP2Q8NFQ8 470 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 OR5W2Q8NH69 310 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 NUDT8Q8WV74 236 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 SDF2Q99470 211 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 CCL19Q99731 98 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 SSU72Q9NP77 194 aaKnown RBP12.82□□□□□ -0.36
SNRNP40-203ENST00000463988 DSCAMO60469 2012 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 NPIPA5A0A0B4J1W7 369 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 FAM171A2A8MVW0 826 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 NPIPA7E9PJI5 369 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 RNASET2O00584 256 aaKnown RBP12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 BIRC5O15392 142 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF264O43296 627 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 DNAJA2O60884 412 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 SERPINE1P05121 402 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 GUSBP08236 651 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 NPIPA8P0DM63 369 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 PRKCAP17252 672 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 SHC1P29353 583 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 Q5PR19 223 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 C6orf120Q7Z4R8 191 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 KIRREL3Q8IZU9 778 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 STEAP2Q8NFT2 490 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 OR8J2Q8NGG1 315 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 PPP1R14CQ8TAE6 165 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 OIT3Q8WWZ8 545 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 ROBO4Q8WZ75 1007 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 ARL8AQ96BM9 186 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 TACO1Q9BSH4 297 aaKnown RBP12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 ACTR6Q9GZN1 396 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF395Q9H8N7 513 aaPredicted RBP12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 KLHL13Q9P2N7 655 aa12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.81□□□□□ -0.36
SNRNP40-203ENST00000463988 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 STX11O75558 287 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 PRKD3O94806 890 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 YES1P07947 543 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 UBL4AP11441 157 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 PAX1P15863 534 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 MATN1P21941 496 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 ADSLP30566 484 aaPredicted RBP12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 ABCE1P61221 599 aaKnown RBP12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 SELENBP1Q13228 472 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 CBFBQ13951 182 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 ZNF141Q15928 474 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 PGS1Q32NB8 556 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 TMEM201Q5SNT2 666 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
SNRNP40-203ENST00000463988 PLEKHM3Q6ZWE6 761 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms