RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SERPINB4P48594 390 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 PRIM2P49643 509 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF83P51522 516 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 RASGEF1BQ0VAM2 473 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 HSPB3Q12988 150 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 GGTLC2Q14390 218 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 UNC50Q53HI1 259 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF678Q5SXM1 525 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF544Q6NX49 715 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZDHHC24Q6UX98 284 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF551Q7Z340 670 aaPredicted RBP12.77□□□□□ -0.37
SMC1A-204ENST00000463684 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZFP90Q8TF47 636 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF775Q96BV0 537 aaPredicted RBP12.77□□□□□ -0.37
SMC1A-204ENST00000463684 KLHDC3Q9BQ90 382 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 PSD2Q9BQI7 771 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 CXorf36Q9H7Y0 433 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 MYNNQ9NPC7 610 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 TIMM22Q9Y584 194 aa12.77□□□□□ -0.37
SMC1A-204ENST00000463684 GPC6Q9Y625 555 aaPredicted RBP12.77□□□□□ -0.37
SMC1A-204ENST00000463684 CIB4A0PJX0 185 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 SERTM1A2A2V5 107 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 EFNA2O43921 213 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 ENO1P06733 434 aaKnown RBP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 SBK3P0C264 359 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 APEHP13798 732 aaKnown RBP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 CD40P25942 277 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 MAP3K8P41279 467 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 SERPINB9P50453 376 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 PDLIM4P50479 330 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 RAC3P60763 192 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 CHRNEQ04844 493 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 TRADDQ15628 312 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 IMPG1Q17R60 797 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 MTERF4Q7Z6M4 381 aaKnown RBP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 ZAR1Q86SH2 424 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 TMEM151AQ8N4L1 468 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF433Q8N7K0 673 aaPredicted RBP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 NUP43Q8NFH3 380 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 OR52N5Q8NH56 324 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 PHOSPHO1Q8TCT1 267 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 HOXB13Q92826 284 aaPredicted RBP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 MSI2Q96DH6 328 aaKnown RBP12.76□□□□□ -0.37
SMC1A-204ENST00000463684 PIMREGQ9BSJ6 248 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 INPP5KQ9BT40 448 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
SMC1A-204ENST00000463684 ESYT3A0FGR9 886 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 CCT8L1PA6NM43 557 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 NDUFS8O00217 210 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 SPRY1O43609 319 aaPredicted RBP12.75□□□□□ -0.37
SMC1A-204ENST00000463684 TCF21O43680 179 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 HSPA4LO95757 839 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 TGFAP01135 160 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ALOX5P09917 674 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ACP2P11117 423 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 COX5AP20674 150 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 IMPDH1P20839 514 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 P2RX1P51575 399 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 PKNOX1P55347 436 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ZNF117Q03924 483 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 C2orf54Q08AI8 447 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 CD226Q15762 336 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
SMC1A-204ENST00000463684 C12orf54Q6X4T0 127 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 IKBIPQ70UQ0 350 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 GALNT5Q7Z7M9 940 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 UBE2J2Q8N2K1 259 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 SLC16A11Q8NCK7 471 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 FAM76AQ8TAV0 307 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 FBXO30Q8TB52 745 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ARL8AQ96BM9 186 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 C3orf49Q96BT1 292 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 PLA2G12AQ9BZM1 189 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 C12orf65Q9H3J6 166 aaKnown RBP12.75□□□□□ -0.37
SMC1A-204ENST00000463684 COQ10BQ9H8M1 238 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ING1Q9UK53 422 aaPredicted RBP12.75□□□□□ -0.37
SMC1A-204ENST00000463684 POLR3HQ9Y535 204 aaPredicted RBP12.75□□□□□ -0.37
SMC1A-204ENST00000463684 ATP23Q9Y6H3 246 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
SMC1A-204ENST00000463684 A0A1W2PNR3 127 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 H3BNH8 94 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 M0R1B8 84 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 GTPBP1O00178 669 aaKnown RBP12.74□□□□□ -0.37
SMC1A-204ENST00000463684 PDPK1O15530 556 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 CYTIPO60759 359 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 RAD51DO75771 328 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 LY6HO94772 140 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 APOBEC3AP31941 199 aaPredicted RBP12.74□□□□□ -0.37
SMC1A-204ENST00000463684 NR4A2P43354 598 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 SPOCK1Q08629 439 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 LCP2Q13094 533 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 SELENBP1Q13228 472 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 DUSP5Q16690 384 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 IQCCQ4KMZ1 466 aa12.74□□□□□ -0.37
SMC1A-204ENST00000463684 LRIG3Q6UXM1 1119 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms