RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TGFBR1P36897 503 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 TMPRSS3P57727 454 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 TAS2R41P59536 307 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 BTN3A2P78410 334 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 CHRNEQ04844 493 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 C1DQ13901 141 aaKnown RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 GINS1Q14691 196 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 DECR1Q16698 335 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 TSTQ16762 297 aaKnown RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 ARHGAP11BQ3KRB8 267 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 SYT14P1Q58G82 188 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 AGAP7PQ5VUJ5 663 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 ZCCHC12Q6PEW1 402 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 INO80CQ6PI98 192 aaPredicted RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 TIPARPQ7Z3E1 657 aaKnown RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 C16orf62Q7Z3J2 963 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 CLDN22Q8N7P3 220 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 KCT2Q8NC54 265 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 NLGN4YQ8NFZ3 816 aaPredicted RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 OR4K14Q8NGD5 310 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 OR9A2Q8NGT5 310 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 ADAMTS15Q8TE58 950 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 ACOT11Q8WXI4 607 aaPredicted RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 MACROD1Q9BQ69 325 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 CENPOQ9BU64 300 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
PTPRD-207ENST00000463477 CPNE5Q9HCH3 593 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 MED17Q9NVC6 651 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 SOHLH2Q9NX45 425 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 DNAJC27Q9NZQ0 273 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 SERTAD3Q9UJW9 196 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 KCNE3Q9Y6H6 103 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 ITPR1Q14643 2758 aa9.17□□□□□ -0.94
PTPRD-207ENST00000463477 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 LOC100506127A0A0U1RQW1 187 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TMEM129A0AVI4 362 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZSCAN9O15535 394 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PRODHO43272 600 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 B3GALT2O43825 422 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PRKYO43930 277 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 KIAA0513O60268 411 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 RAD1O60671 282 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SOX30O94993 753 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 IGFBP1P08833 259 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 C8orf89P0DMQ9 161 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PVRP15151 417 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF28P17035 718 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TNNI3P19429 210 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CPN2P22792 545 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 FPR3P25089 353 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 STAT5AP42229 794 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 GAS1P54826 345 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 COPZ1P61923 177 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 RAB40BQ12829 278 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF750Q32MQ0 723 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 EIPR1Q53HC9 387 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PWWP2BQ6NUJ5 590 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SLC27A4Q6P1M0 643 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 FIGLAQ6QHK4 219 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 FRRS1Q6ZNA5 592 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ABHD13Q7L211 337 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ESX1Q8N693 406 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 C19orf47Q8N9M1 422 aaKnown RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 OR9Q1Q8NGQ5 310 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 OR52P1PQ8NH57 321 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PIGXQ8TBF5 258 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TEX47Q8TBZ9 253 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TMEM163Q8TC26 289 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SLC35A4Q96G79 324 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF582Q96NG8 517 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CHCHD6Q9BRQ6 235 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 YIPF4Q9BSR8 244 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ULBP3Q9BZM4 244 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SAP130Q9H0E3 1048 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 FAM60AQ9NP50 221 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TVP23BQ9NYZ1 205 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CRNNQ9UBG3 495 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 DAPP1Q9UN19 280 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CHST2Q9Y4C5 530 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SLC22A7Q9Y694 548 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 MGAQ8IWI9 3026 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SPTBP11277 2137 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ADAMTS20P59510 1910 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 LOC400499M0QZD8 3231 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 SCN2AQ99250 2005 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 A0A1W2PS29 197 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 KDM4EB2RXH2 506 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 AP3D1O14617 1153 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 KLF4O43474 513 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TLX2O43763 284 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 GPX5O75715 221 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 MED26O95402 600 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TIAF1O95411 115 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 AK1P00568 194 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 STATHP02808 62 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 GUSBP08236 651 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 HSMCR30P0CW71 290 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 GAAP10253 952 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms