RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 LYPLA1O75608 230 aaPredicted RBP13.71□□□□□ -0.21
SKA3-204ENST00000462482 SHBGP04278 402 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.21
SKA3-204ENST00000462482 YES1P07947 543 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 IDUAP35475 653 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 CCT3P49368 545 aaKnown RBP13.71□□□□□ -0.21
SKA3-204ENST00000462482 VEZF1Q14119 521 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 P2RY6Q15077 328 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 ATP6AP1LQ52LC2 224 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 DCST2Q5T1A1 773 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 SFRP5Q5T4F7 317 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 ADAM5Q6NVV9 412 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 CDC73Q6P1J9 531 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 BHLHB9Q6PI77 547 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 TUSC5Q8IXB3 177 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 GSPT2Q8IYD1 628 aaKnown RBP13.71□□□□□ -0.21
SKA3-204ENST00000462482 BANPQ8N9N5 519 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 EIF1ADQ8N9N8 165 aaKnown RBP13.71□□□□□ -0.21
SKA3-204ENST00000462482 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 MOAP1Q96BY2 351 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 TUBB1Q9H4B7 451 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 TRAF6Q9Y4K3 522 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 ACTL7BQ9Y614 415 aa13.71□□□□□ -0.21
SKA3-204ENST00000462482 PIP5K1BO14986 540 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 CFLARO15519 480 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 NPHS1O60500 1241 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 PEX11AO75192 247 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 ADAP00813 363 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 FGF4P08620 206 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 CCR4P51679 360 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 ATP12AP54707 1039 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 PCLAFQ15004 111 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 KLHL26Q53HC5 615 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 TFAP2EQ6VUC0 442 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 NUFIP2Q7Z417 695 aaKnown RBP13.7□□□□□ -0.22
SKA3-204ENST00000462482 GABRG1Q8N1C3 465 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 ZNF619Q8N2I2 560 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 OR7A2PQ8NGA2 310 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 ZFP90Q8TF47 636 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 IGFBPL1Q8WX77 278 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 MRGPRX4Q96LA9 322 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 POTEKPQ9BYX7 375 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 ALG2Q9H553 416 aa13.7□□□□□ -0.22
SKA3-204ENST00000462482 SIRT3Q9NTG7 399 aaPredicted RBP13.7□□□□□ -0.22
SKA3-204ENST00000462482 MED12LQ86YW9 2145 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 A0A1W2PP18 115 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 TLDC2A0PJX2 215 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 GCM2O75603 506 aaPredicted RBP13.69□□□□□ -0.22
SKA3-204ENST00000462482 LAMP1P11279 417 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 SHC1P29353 583 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 ZNF844Q08AG5 666 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 ITGADQ13349 1161 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 TNK1Q13470 666 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 CBFBQ13951 182 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 ARL13AQ5H913 290 aaPredicted RBP13.69□□□□□ -0.22
SKA3-204ENST00000462482 EXOSC6Q5RKV6 272 aaKnown RBP13.69□□□□□ -0.22
SKA3-204ENST00000462482 NCMAPQ5T1S8 102 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 CBLN3Q6UW01 205 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 SSX8Q7RTT4 187 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 PRIMA1Q86XR5 153 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 RAB3IL1Q8TBN0 382 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 SFXN5Q8TD22 340 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 EPS8L3Q8TE67 593 aaKnown RBP13.69□□□□□ -0.22
SKA3-204ENST00000462482 SMAP2Q8WU79 429 aaPredicted RBP13.69□□□□□ -0.22
SKA3-204ENST00000462482 MUCL1Q96DR8 90 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 SRXN1Q9BYN0 137 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 SERINC1Q9NRX5 453 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 FAIMQ9NVQ4 179 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 DTNAQ9Y4J8 743 aa13.69□□□□□ -0.22
SKA3-204ENST00000462482 NPIPA5A0A0B4J1W7 369 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 DUXAA6NLW8 204 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 KIAA1324LA8MWY0 1029 aaPredicted RBP13.68□□□□□ -0.22
SKA3-204ENST00000462482 TMEM233B4DJY2 109 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 NPIPA7E9PJI5 369 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 ZNF264O43296 627 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 EIF4E2O60573 245 aaKnown RBP13.68□□□□□ -0.22
SKA3-204ENST00000462482 C6orf47O95873 294 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 CHRNGP07510 517 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 NPIPA8P0DM63 369 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 UBL4AP11441 157 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 ENPP1P22413 925 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 SOAT1P35610 550 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 RNF144AP50876 292 aaPredicted RBP13.68□□□□□ -0.22
SKA3-204ENST00000462482 RAC3P60763 192 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 DMTNQ08495 405 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 TSC22D1Q15714 1073 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 TAB1Q15750 504 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 STK11Q15831 433 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
SKA3-204ENST00000462482 OR5W2Q8NH69 310 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 AGR3Q8TD06 166 aa13.68□□□□□ -0.22
SKA3-204ENST00000462482 GPR119Q8TDV5 335 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms