RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 RAPGEF5Q92565 580 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ULK4Q96C45 1275 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 COPS8Q99627 209 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 UTP23Q9BRU9 249 aaKnown RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 VN1R1Q9GZP7 353 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 HSD3B7Q9H2F3 369 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 CLSTN2Q9H4D0 955 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 HAUS4Q9H6D7 363 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ZDHHC11Q9H8X9 412 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPS3-204ENST00000462236 RCC2Q9P258 522 aaKnown RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 STOX2Q9P2F5 926 aaPredicted RBP4.33□□□□□ -1.72
COPS3-204ENST00000462236 PLAGL1Q9UM63 463 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
COPS3-204ENST00000462236 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 IGHV3-20A0A0C4DH32 117 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 A0A1W2PP11 408 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 FEZF1A0PJY2 475 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 C5orf60A6NFR6 353 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 C15orf62A8K5M9 175 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 RASGRF2O14827 1237 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 NDUFS4O43181 175 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 AP2A2O94973 939 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PPP1R3DO95685 299 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 IGHG3P01860 377 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 HEXBP07686 556 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PRSS56P0CW18 603 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 C8orf89P0DMQ9 161 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 RALBP11234 206 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 MMP9P14780 707 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 CD9P21926 228 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 SIRPAP78324 504 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PLOD1Q02809 727 aaPredicted RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 AP1B1Q10567 949 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 SNTB1Q13884 538 aaKnown RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 FAM53BQ14153 422 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PDK1Q15118 436 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 TAZQ16635 292 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 HADHQ16836 314 aaKnown RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 GPR33Q49SQ1 333 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 DNAJC21Q5F1R6 531 aaKnown RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 GPR139Q6DWJ6 353 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 DHRS7BQ6IAN0 325 aaPredicted RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 ARHGAP11AQ6P4F7 1023 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PACS1Q6VY07 963 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PLEKHM3Q6ZWE6 761 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 ANKRD37Q7Z713 158 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 SERPINA9Q86WD7 417 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PIANPQ8IYJ0 282 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 SLC22A15Q8IZD6 547 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 CLDN19Q8N6F1 224 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 RELL2Q8NC24 303 aaPredicted RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 MCUQ8NE86 351 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 PLPP5Q8NEB5 264 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 OR2A1Q8NGT9 310 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 GOT1L1Q8NHS2 421 aaPredicted RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 GSDMBQ8TAX9 411 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 UTP15Q8TED0 518 aaKnown RBP4.32□□□□□ -1.72
COPS3-204ENST00000462236 DCUN1D1Q96GG9 259 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 IL17FQ96PD4 163 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 CYTH2Q99418 400 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 NEURL2Q9BR09 285 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 MMP27Q9H306 513 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 VPS37BQ9H9H4 285 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 TRPC4Q9UBN4 977 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 CRLS1Q9UJA2 301 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 ANAPC7Q9UJX3 599 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 ZNF148Q9UQR1 794 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 ALG6Q9Y672 507 aa4.32□□□□□ -1.72
COPS3-204ENST00000462236 IGHV4OR15-8A0A075B7B6 117 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 IGKV1-8A0A0C4DH67 115 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 A0A0J9YVX5 310 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 C2orf81A6NN90 581 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 RNF212BA8MTL3 300 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 A8MUI8 341 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 ARHGEF33A8MVX0 844 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 ZNF587BE7ETH6 402 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 H0YGG7 62 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 DVL1O14640 695 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 ERAL1O75616 437 aaKnown RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 PROSCO94903 275 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 AGTP01019 485 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 ERGP11308 486 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 IL11P20809 199 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 HRH2P25021 359 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 PSMB5P28074 263 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 MLF1P58340 268 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 POU3F1Q03052 451 aaPredicted RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 RELAQ04206 551 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 CAPRIN1Q14444 709 aaKnown RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 ITIH4Q14624 930 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 TOMM20Q15388 145 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 EXT1Q16394 746 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 RIPPLY2Q5TAB7 128 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 UNC5DQ6UXZ4 953 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 CLEC17AQ6ZS10 378 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms