RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 SMARCD3Q6STE5 483 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 RTL10Q7L3V2 364 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 ZFP41Q8N8Y5 198 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 SDR9C7Q8NEX9 313 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 OR4A4PQ8NGN8 299 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 OR5M1Q8NGP8 315 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 EEF1AKMT1Q8WVE0 214 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 CASD1Q96PB1 797 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 NRIP2Q9BQI9 281 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
LINC01140-201ENST00000461990 NMRK2Q9NPI5 230 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 MRPL17Q9NRX2 175 aaKnown RBP8.6□□□□□ -1.03
LINC01140-201ENST00000461990 SPG21Q9NZD8 308 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 KCNIP3Q9Y2W7 256 aa8.6□□□□□ -1.03
LINC01140-201ENST00000461990 A0A1B0GVC2 190 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CXorf65A6NEN9 183 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 A6NIN4 97 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 FAAHO00519 579 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 RNF13O43567 381 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 F2P00734 622 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 INHAP05111 366 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 ASGR2P07307 311 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 PRKAR2AP13861 404 aaKnown RBP8.59□□□□□ -1.03
LINC01140-201ENST00000461990 ELNP15502 786 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CELP19835 753 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 TACR1P25103 407 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 MAPK9P45984 424 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CDK5Q00535 292 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 TNFRSF9Q07011 255 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 SRSF4Q08170 494 aaKnown RBP8.59□□□□□ -1.03
LINC01140-201ENST00000461990 GAGE1Q13065 139 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 INSL4Q14641 139 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CSRP2Q16527 193 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CYB5R2Q6BCY4 276 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 SBSNQ6UWP8 590 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 ZNF783Q6ZMS7 281 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 SLC30A8Q8IWU4 369 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 OR2L5Q8NG80 312 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 OR2AK2Q8NG84 335 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 COPS8Q99627 209 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 GINS4Q9BRT9 223 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 SLC39A8Q9C0K1 460 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 WDR13Q9H1Z4 485 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CRLF2Q9HC73 371 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 WASF3Q9UPY6 502 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 RPL36A-HNRNPH2H7BZ11 118 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 FGF10O15520 208 aaPredicted RBP8.59□□□□□ -1.03
LINC01140-201ENST00000461990 TAPBPO15533 448 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CD8AP01732 235 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 IGHA1P01876 353 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 SLC25A4P12235 298 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 RAB5AP20339 215 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CCR1P32246 355 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 MTNR1AP48039 350 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 BCL2L1Q07817 233 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 ARTNQ5T4W7 220 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 UNQ6494/PRO21346Q6UXR6 183 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 SLC36A4Q6YBV0 504 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 HFE2Q6ZVN8 426 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 TEX19Q8NA77 164 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 OR4Q3Q8NH05 313 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 BBS10Q8TAM1 723 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 LCN9Q8WX39 176 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 LRFN5Q96NI6 719 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 CLCC1Q96S66 551 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 TRIM62Q9BVG3 475 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 TMEM38AQ9H6F2 299 aa8.59□□□□□ -1.03
LINC01140-201ENST00000461990 NLE1Q9NVX2 485 aaPredicted RBP8.59□□□□□ -1.03
LINC01140-201ENST00000461990 ANXA2P07355 339 aaKnown RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 IGFBP1P08833 259 aaPredicted RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 IQCF3P0C7M6 154 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 LINC00614P0C842 121 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 MSX1P28360 303 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 SHC1P29353 583 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 AQP1P29972 269 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 EPHB3P54753 998 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 LSM6P62312 80 aaKnown RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 RAP1AP62834 184 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 FZD5Q13467 585 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 C18orf21Q32NC0 220 aaPredicted RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 CDPF1Q6NVV7 123 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 GAREM2Q75VX8 874 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 HJURPQ8NCD3 748 aaPredicted RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 CSGALNACT1Q8TDX6 532 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 MAL2Q969L2 176 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 POM121Q96HA1 1249 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 TSSK3Q96PN8 268 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 TEFMQ96QE5 360 aaKnown RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 MGME1Q9BQP7 344 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 MFRPQ9BY79 579 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 OPN3Q9H1Y3 402 aaPredicted RBP8.59□□□□□ -1.04
LINC01140-201ENST00000461990 CERS4Q9HA82 394 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 TVP23BQ9NYZ1 205 aa8.59□□□□□ -1.04
LINC01140-201ENST00000461990 ZNF219Q9P2Y4 722 aaPredicted RBP8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms