RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MSANTD1Q6ZTZ1 278 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 KIF18BQ86Y91 864 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 GTPBP8Q8N3Z3 284 aaPredicted RBP13.86□□□□□ -0.19
VARS-219ENST00000461328 TOR1AIP2Q8NFQ8 470 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 VPS33AQ96AX1 596 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 THOC1Q96FV9 657 aaKnown RBP13.86□□□□□ -0.19
VARS-219ENST00000461328 CCDC28BQ9BUN5 200 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 TMEM185BQ9H7F4 350 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 POLE3Q9NRF9 147 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 NUP214P35658 2090 aaPredicted RBP13.86□□□□□ -0.19
VARS-219ENST00000461328 OTOGQ6ZRI0 2925 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 UQCRHLA0A096LP55 91 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 C7orf72A4D263 438 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 NR5A2O00482 541 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 ZNF264O43296 627 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 FCMRO60667 390 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 CSTAP01040 98 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 EIF1P41567 113 aaKnown RBP13.85□□□□□ -0.19
VARS-219ENST00000461328 CPA2P48052 419 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 SUCLG1P53597 346 aaKnown RBP13.85□□□□□ -0.19
VARS-219ENST00000461328 EEF1A1P68104 462 aaKnown RBP13.85□□□□□ -0.19
VARS-219ENST00000461328 TXNL4AP83876 142 aaKnown RBP13.85□□□□□ -0.19
VARS-219ENST00000461328 FUT5Q11128 374 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 PON3Q15166 354 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 EEF1A1P5Q5VTE0 462 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 CBLN3Q6UW01 205 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 EIF3MQ7L2H7 374 aaKnown RBP13.85□□□□□ -0.19
VARS-219ENST00000461328 LUZP2Q86TE4 346 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 ZNF619Q8N2I2 560 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 FAM222BQ8WU58 562 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 KLHDC3Q9BQ90 382 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 RBM24Q9BX46 236 aaKnown RBP13.85□□□□□ -0.19
VARS-219ENST00000461328 PRRG4Q9BZD6 226 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 JKAMPQ9P055 326 aa13.85□□□□□ -0.19
VARS-219ENST00000461328 POLQO75417 2590 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 DOCK7Q96N67 2140 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 CENPVL1A0A0U1RR11 272 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 TUBAL3A6NHL2 446 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 HMGN4O00479 90 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 EIF4E2O60573 245 aaKnown RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 UGT2B17O75795 530 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 H6PDO95479 791 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 C1QCP02747 245 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 OPN1LWP04000 364 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 UBTFL6P0CB48 400 aaPredicted RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 NR2F1P10589 423 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 SFTPDP35247 375 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 CRATP43155 626 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 CLDN15P56746 228 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 CBFBQ13951 182 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 ZNF141Q15928 474 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 HSP90B2PQ58FF3 399 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 COX20Q5RI15 118 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 PDSS1Q5T2R2 415 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 OR2A2Q6IF42 318 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 TYW3Q6IPR3 259 aaKnown RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 FRRS1Q6ZNA5 592 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 HMGN2P46Q86SG4 172 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 CNEP1R1Q8N9A8 125 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 OR5W2Q8NH69 310 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 FNDC9Q8TBE3 224 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 FIG4Q92562 907 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 NPAS1Q99742 590 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 GPATCH1Q9BRR8 931 aaKnown RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 PIGMQ9H3S5 423 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 DNAJB12Q9NXW2 375 aaKnown RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 CCDC167Q9P0B6 97 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 PACSIN3Q9UKS6 424 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 ICAM5Q9UMF0 924 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 LIPT1Q9Y234 373 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 ZNF175Q9Y473 711 aa13.84□□□□□ -0.19
VARS-219ENST00000461328 GPC6Q9Y625 555 aaPredicted RBP13.84□□□□□ -0.19
VARS-219ENST00000461328 A0A1W2PNV4 684 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 TNFSF11O14788 317 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 SYNGR4O95473 234 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 LINGO3P0C6S8 592 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 FCGR2AP12318 317 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 ELK4P28324 431 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 RAC1P63000 192 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 SIRPAP78324 504 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 SORDQ00796 357 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 SQLEQ14534 574 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 QPRTQ15274 297 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 SYPL1Q16563 259 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 GTDC1Q4AE62 458 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 SLC2A7Q6PXP3 512 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 GGNQ86UU5 652 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 ATP6V1C2Q8NEY4 427 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 OR10D3Q8NH80 312 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 FBXO27Q8NI29 283 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 POC1BQ8TC44 478 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 ZFP90Q8TF47 636 aa13.83□□□□□ -0.2
VARS-219ENST00000461328 AURKBQ96GD4 344 aaPredicted RBP13.83□□□□□ -0.2
VARS-219ENST00000461328 TRNT1Q96Q11 434 aaKnown RBP13.83□□□□□ -0.2
VARS-219ENST00000461328 POLDIP3Q9BY77 421 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms