RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 AK1P00568 194 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 CPN1P15169 458 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 PAX1P15863 534 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 MATN1P21941 496 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 PSMA4P25789 261 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 POLR2JP52435 117 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 DSCR4P56555 118 aaPredicted RBP12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 TXNL4AP83876 142 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 PLAURQ03405 335 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 CD226Q15762 336 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 ARHGAP11BQ3KRB8 267 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 LRIF1Q5T3J3 769 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 SZRD1Q7Z422 152 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 GALNT10Q86SR1 603 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 MARCH3Q86UD3 253 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 RFWD2Q8NHY2 731 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 ADAMTS15Q8TE58 950 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 DUSP19Q8WTR2 217 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 OIT3Q8WWZ8 545 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 C1GALT1C1Q96EU7 318 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 WDYHV1Q96HA8 205 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 ZNF317Q96PQ6 595 aaPredicted RBP12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 UCN2Q96RP3 112 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 SLC35A5Q9BS91 424 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 GALNT8Q9NY28 637 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 FAF1Q9UNN5 650 aaPredicted RBP12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 TESMINQ9Y4I5 508 aa12.3□□□□□ -0.44
SCAMP4-206ENST00000460767 C7orf72A4D263 438 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 SCO2O43819 266 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 FCMRO60667 390 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 TMCC2O75069 709 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 CPSF4O95639 269 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 ACTL6AO96019 429 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 C8BP07358 591 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 BMP2P12643 396 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 CHMP24386 653 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 TRPC1P48995 793 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 LHX2P50458 406 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 CLDN18P56856 261 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 GANABQ14697 944 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 POU4F3Q15319 338 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 ZNF141Q15928 474 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 SPDYE7PQ495Y7 208 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 GLYR1Q49A26 553 aaPredicted RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 WIPI1Q5MNZ9 446 aaPredicted RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 OR5M10Q6IEU7 315 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 MSRB3Q8IXL7 192 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 ARFGAP2Q8N6H7 521 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 FAM71CQ8NEG0 241 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 JADE3Q92613 823 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 VPS33AQ96AX1 596 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 SLC35G5Q96KT7 338 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 PANX1Q96RD7 426 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 ZBTB18Q99592 522 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 RBM24Q9BX46 236 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 HOXD1Q9GZZ0 328 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 PAIP1Q9H074 479 aaKnown RBP12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 OR51I1Q9H343 314 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 SDHAF3Q9NRP4 125 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 PCDHGB4Q9UN71 923 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 SLC6A5Q9Y345 797 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 ATRQ13535 2644 aa12.29□□□□□ -0.44
SCAMP4-206ENST00000460767 MED12LQ86YW9 2145 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 CENPVL1A0A0U1RR11 272 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 TRIM64A6NGJ6 449 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 TRIM64BA6NI03 449 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 SMAD7O15105 426 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 KIAA0513O60268 411 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 TRAPPC6AO75865 159 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 NTN1O95631 604 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 AGR2O95994 175 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 ZNF708P17019 499 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 DPP4P27487 766 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 SOAT1P35610 550 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 ATP12AP54707 1039 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 CLDN15P56746 228 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 EEF1A1P68104 462 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 GUCY1A3Q02108 690 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 KRTAP1-1Q07627 177 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 SQLEQ14534 574 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 BCL2A1Q16548 175 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 ACKR1Q16570 336 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 TIGD2Q4W5G0 525 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 EEF1A1P5Q5VTE0 462 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 METTL21CQ5VZV1 264 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 FRRS1Q6ZNA5 592 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 MTERF4Q7Z6M4 381 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 RNF130Q86XS8 419 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 MISPQ8IVT2 679 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 ZPLD1Q8TCW7 415 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 IGFBPL1Q8WX77 278 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 ZNF524Q96C55 264 aa12.28□□□□□ -0.44
SCAMP4-206ENST00000460767 CCL19Q99731 98 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms