RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 TMEM53Q6P2H8 277 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 MTFR2Q6P444 385 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 RASSF6Q6ZTQ3 369 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 GDPD1Q8N9F7 314 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 OR7G2Q8NG99 324 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 OR10H5Q8NGA6 315 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 FKBP10Q96AY3 582 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SLC35A4Q96G79 324 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 BTBD2Q9BX70 525 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 C1QTNF2Q9BXJ5 285 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 NT5DC2Q9H857 520 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SIDT1Q9NXL6 827 aaKnown RBP10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SCML1Q9UN30 329 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 DIMT1Q9UNQ2 313 aaKnown RBP10.84□□□□□ -0.67
NPHP4-204ENST00000460696 A0A0J9YY10 115 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ANKRD33BA6NCL7 494 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF879B4DU55 563 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF670-ZNF695F2Z2N8 137 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 RGS9O75916 674 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-204ENST00000460696 DRD1P21728 446 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 DRD3P35462 400 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 AGAP7PQ5VUJ5 663 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 RPL13AP3Q6NVV1 102 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 XKRXQ6PP77 449 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 PAMR1Q6UXH9 720 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 CCDC71Q8IV32 467 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-204ENST00000460696 METTL21AQ8WXB1 218 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 EFHD2Q96C19 240 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-204ENST00000460696 G6PC3Q9BUM1 346 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 CDCA4Q9BXL8 241 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 KIR3DX1Q9H7L2 352 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 CENPMQ9NSP4 180 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 GRHPRQ9UBQ7 328 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 CACNA1AO00555 2505 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SERTM1A2A2V5 107 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ITGA10O75578 1167 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SLC2A10O95528 541 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 IL1AP01583 271 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 TACSTD2P09758 323 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SRFP11831 508 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 C4BPBP20851 252 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 RABIFP47224 123 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 TMEM196Q5HYL7 178 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 PRR22Q8IZ63 422 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 OR5W2Q8NH69 310 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ASB15Q8WXK1 588 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ZNF559Q9BR84 538 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 SLC6A20Q9NP91 592 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 ENTPD2Q9Y5L3 495 aa10.84□□□□□ -0.67
NPHP4-204ENST00000460696 PEX12O00623 359 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 SCO2O43819 266 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 FUT1P19526 365 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 HSD17B12Q53GQ0 312 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 AGAP6Q5VW22 663 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 MCATQ8IVS2 390 aaKnown RBP10.83□□□□□ -0.68
NPHP4-204ENST00000460696 TIGD4Q8IY51 512 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 NANOGP1Q8N7R0 232 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 C4orf36Q96KX1 117 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 AGAP4Q96P64 663 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 OPALINQ96PE5 141 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 DPAGT1Q9H3H5 408 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 HHATLQ9HCP6 504 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 BABAM2Q9NXR7 383 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 GRIP1Q9Y3R0 1128 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 LOC105369274A0A096LPK9 316 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 LOC102723532A0A0G2JNH3 316 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 MEIOCA2RUB1 952 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 SYT5O00445 386 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 OR2B3O76000 313 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 TEAD1P28347 426 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 PSMB10P40306 273 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 PITPNAQ00169 270 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 MAB21L1Q13394 359 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 CCINQ13939 588 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 ELOCQ15369 112 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 PLK5Q496M5 336 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 C3orf38Q5JPI3 329 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 ARHGAP11AQ6P4F7 1023 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 TMEM64Q6YI46 380 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 OR4N4Q8N0Y3 316 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 OR13H1Q8NG92 308 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 NSMAFQ92636 917 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 TANKQ92844 425 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 TEX101Q9BY14 249 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 CHST8Q9H2A9 424 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 UBQLN3Q9H347 655 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 OSGIN1Q9UJX0 560 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 ERVK-11Q9UQG0 969 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 ANKRD36A6QL64 1941 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 PATJQ8NI35 1801 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 ZC3H12DA2A288 527 aaKnown RBP10.83□□□□□ -0.68
NPHP4-204ENST00000460696 GABRPO00591 440 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 NDUFB2O95178 105 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 PROS1P07225 676 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 GPR143P51810 404 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 WDR45BQ5MNZ6 344 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 C1orf189Q5VU69 101 aa10.83□□□□□ -0.68
NPHP4-204ENST00000460696 GKN2Q86XP6 184 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms