RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	TMEM38A	Q9H6F2	299 aa		9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	MTHFD2L	Q9H903	347 aa	Predicted RBP	9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	RLIM	Q9NVW2	624 aa		9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	DNAJB12	Q9NXW2	375 aa	Known RBP	9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	SUCO	Q9UBS9	1254 aa	Known RBP	9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	ADAM21	Q9UKJ8	722 aa		9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	ACAD8	Q9UKU7	415 aa		9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	DNAJC13	O75165	2243 aa		9.27	□□□□□ -0.93
MRPL55-223	ENST00000459783	FREM3	P0C091	2139 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	KIAA1549	Q9HCM3	1950 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	DOPEY1	Q5JWR5	2465 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783		A0A1B0GUH1	482 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	C7orf72	A4D263	438 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783		E9PLN8	166 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	GTPBP1	O00178	669 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	ETV2	O00321	342 aa	Predicted RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	TPST1	O60507	370 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	EIF4E2	O60573	245 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	ACTL6A	O96019	429 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	OPN1LW	P04000	364 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	GLI4	P10075	376 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	PRG2	P13727	222 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	NID1	P14543	1247 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CPN1	P15169	458 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	PRKCA	P17252	672 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	PPIB	P23284	216 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	SLC6A2	P23975	617 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CHM	P24386	653 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CRISP3	P54108	245 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	SUMO3	P55854	103 aa	Predicted RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	PCBP3	P57721	371 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	KCNJ10	P78508	379 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	HPCA	P84074	193 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CDK6	Q00534	326 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	QPRT	Q15274	297 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	MAPRE2	Q15555	327 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CTU2	Q2VPK5	515 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	GLYR1	Q49A26	553 aa	Predicted RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	ACSF3	Q4G176	576 aa	Predicted RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	GLIPR1L2	Q4G1C9	344 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	MRPL2	Q5T653	305 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	C1orf185	Q5T7R7	199 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	WLS	Q5T9L3	541 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	RPTN	Q6XPR3	784 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	EIF3M	Q7L2H7	374 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	GGN	Q86UU5	652 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	OR52P1P	Q8NH57	321 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	OR5W2	Q8NH69	310 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	FBXO27	Q8NI29	283 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	RP9	Q8TA86	221 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	SSC4D	Q8WTU2	575 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	WDR60	Q8WVS4	1066 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	OIT3	Q8WWZ8	545 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	RNF145	Q96MT1	663 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	VKORC1	Q9BQB6	163 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	WFDC6	Q9BQY6	131 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	TTYH2	Q9BSA4	534 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	THUMPD3	Q9BV44	507 aa	Known RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	TP63	Q9H3D4	680 aa	Predicted RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	RAD21L1	Q9H4I0	556 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	PIF1	Q9H611	641 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	PTGES2	Q9H7Z7	377 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	ARL8B	Q9NVJ2	186 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CMTM6	Q9NX76	183 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	CAMK2A	Q9UQM7	478 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783	ARL2BP	Q9Y2Y0	163 aa		9.26	□□□□□ -0.93
MRPL55-223	ENST00000459783		A0A087WZY1	265 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783		A0A0G2JPF8	293 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CDHR4	A6H8M9	788 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CCT8L1P	A6NM43	557 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	EVPLL	A8MZ36	301 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	HNRNPCL2	B2RXH8	293 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	HNRNPCL3	B7ZW38	293 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783		H3BML4	177 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783		H3BNH8	94 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	AIM2	O14862	343 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	FRS3	O43559	492 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	HNRNPCL1	O60812	293 aa	Known RBP	9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	WDR1	O75083	606 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CYP7B1	O75881	506 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CLDN1	O95832	211 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	FAM107A	O95990	144 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	DBI	P07108	87 aa	Known RBP	9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	GKN3P	P0CG01	181 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	HNRNPCL4	P0DMR1	293 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	AQP1	P29972	269 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	ACAA2	P42765	397 aa	Known RBP	9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CPA2	P48052	419 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CCR4	P51679	360 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	DLX5	P56178	289 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	SESN3	P58005	492 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	SRY	Q05066	204 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	DMTN	Q08495	405 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	SCARB2	Q14108	478 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	SLC25A53	Q5H9E4	307 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	PRAMEF8	Q5VWM4	474 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	PRAMEF7	Q5VXH5	474 aa		9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	CCDC71	Q8IV32	467 aa	Predicted RBP	9.25	□□□□□ -0.93
MRPL55-223	ENST00000459783	TMCO5A	Q8N6Q1	288 aa		9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms