RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 VTCN1Q7Z7D3 282 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 DTX1Q86Y01 620 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 CCDC36Q8IYA8 594 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 OR11G2Q8NGC1 345 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 OR1N1Q8NGS0 311 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 FAM162AQ96A26 154 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 WBP1Q96G27 269 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SEPHS2Q99611 448 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 WFDC6Q9BQY6 131 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 NXF5Q9H1B4 397 aaKnown RBP9.52□□□□□ -0.89
USP39-210ENST00000459775 OR10A4Q9H209 315 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 A0A1W2PPH5 198 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 TCRBV5S2A0A599 114 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SAGE2PA6NJ88 616 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 CLDN24A6NM45 220 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SHOXO15266 292 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 MAN1A2O60476 641 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 TPST1O60507 370 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 C1QL1O75973 258 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 PRKD3O94806 890 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 SNAPINO95295 136 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 PGM3O95394 542 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 ZNF682O95780 498 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 HSMCR30P0CW71 290 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 COX6A1P12074 109 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 BMP2P12643 396 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 MAP3K8P41279 467 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 ATP12AP54707 1039 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 RPS15P62841 145 aaKnown RBP9.52□□□□□ -0.89
USP39-210ENST00000459775 FAM76BQ5HYJ3 339 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 EXOSC6Q5RKV6 272 aaKnown RBP9.52□□□□□ -0.89
USP39-210ENST00000459775 BHLHB9Q6PI77 547 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 RNF111Q6ZNA4 994 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 PM20D2Q8IYS1 436 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 B3GNT7Q8NFL0 401 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 OR14A16Q8NHC5 309 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 CANT1Q8WVQ1 401 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 DAZLQ92904 295 aaKnown RBP9.52□□□□□ -0.89
USP39-210ENST00000459775 SLCO4A1Q96BD0 722 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 TAMM41Q96BW9 452 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 MOAP1Q96BY2 351 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 TRIM15Q9C019 465 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 ZNF160Q9HCG1 818 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 FLRT3Q9NZU0 649 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 NKX1-2Q9UD57 310 aaPredicted RBP9.52□□□□□ -0.89
USP39-210ENST00000459775 CORO2BQ9UQ03 480 aa9.52□□□□□ -0.89
USP39-210ENST00000459775 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
USP39-210ENST00000459775 IGHV1-45A0A0A0MS14 117 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 TRBV11-1A0A0K0K1C0 115 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 H3BUI4 141 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 SLC25A17O43808 307 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 PRAMEF2O60811 474 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 LIFP15018 202 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 ITGA2P17301 1181 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 MMP11P24347 488 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 KDELR2P33947 212 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 PCGF2P35227 344 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 NR0B1P51843 470 aaKnown RBP9.51□□□□□ -0.89
USP39-210ENST00000459775 P2RX3P56373 397 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 PPP2R2BQ00005 443 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 Q0VFX4 171 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 BNIP2Q12982 314 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 BTBD16Q32M84 506 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 LCN8Q6JVE9 175 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 C16orf62Q7Z3J2 963 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 MCEMP1Q8IX19 187 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 LGI4Q8N135 537 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 COX18Q8N8Q8 333 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 CDRT4Q8N9R6 151 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 ADAMTS16Q8TE57 1224 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 RFKQ969G6 155 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 ADIPOR1Q96A54 375 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 TPD52L3Q96J77 140 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 NSMCE2Q96MF7 247 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 LPAR4Q99677 370 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 TMEM38AQ9H6F2 299 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 A4GALTQ9NPC4 353 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 KCNE5Q9UJ90 142 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 NXT1Q9UKK6 140 aaKnown RBP9.51□□□□□ -0.89
USP39-210ENST00000459775 AURKCQ9UQB9 309 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 DTNAQ9Y4J8 743 aa9.51□□□□□ -0.89
USP39-210ENST00000459775 TMEM200CA6NKL6 621 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 C17orf51A8MQB3 221 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 C5orf58C9J3I9 102 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 F5H0A9 414 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 WWP2O00308 870 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 PEX12O00623 359 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 KCNK2O95069 426 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 ACAA1P09110 424 aaPredicted RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 OR1E2P47887 323 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 TMED10P49755 219 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 POLE2P56282 527 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 EBPQ15125 230 aaKnown RBP9.5□□□□□ -0.89
USP39-210ENST00000459775 GPR68Q15743 365 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 MAPK14Q16539 360 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 DUSP7Q16829 419 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 DCST2Q5T1A1 773 aa9.5□□□□□ -0.89
USP39-210ENST00000459775 REEP3Q6NUK4 255 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms