RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ORAI1Q96D31 301 aa13.13□□□□□ -0.31
SCFD1-203ENST00000458591 PEX11GQ96HA9 241 aa13.13□□□□□ -0.31
SCFD1-203ENST00000458591 IFT27Q9BW83 186 aa13.13□□□□□ -0.31
SCFD1-203ENST00000458591 PHPT1Q9NRX4 125 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-203ENST00000458591 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
SCFD1-203ENST00000458591 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
SCFD1-203ENST00000458591 DPP7Q9UHL4 492 aa13.13□□□□□ -0.31
SCFD1-203ENST00000458591 ZNF223Q9UK11 482 aaPredicted RBP13.13□□□□□ -0.31
SCFD1-203ENST00000458591 SGK494L7N484 410 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 RNGTTO60942 597 aaKnown RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR5F1O95221 314 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CD3GP09693 182 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 IFNA8P32881 189 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 BTCP35070 178 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 RIN1Q13671 783 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 EXOSC7Q15024 291 aaKnown RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CEBPEQ15744 281 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CDC73Q6P1J9 531 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 LRRC25Q8N386 305 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 MOAP1Q96BY2 351 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 ORAI3Q9BRQ5 295 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 MTHFD2LQ9H903 347 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 WSB2Q9NYS7 404 aaPredicted RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 POLHQ9Y253 713 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 MRPS7Q9Y2R9 242 aaKnown RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 A0A1W2PRG6 482 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 H0Y8X5 98 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 MEN1O00255 615 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 GNB5O14775 395 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 FABP7O15540 132 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 SLC19A2O60779 497 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CTSVO60911 334 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 LYPD3O95274 346 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CMPK1P30085 196 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR3A3P47888 321 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 FOXK2Q01167 660 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 PDGFRLQ15198 375 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 PRPF38BQ5VTL8 546 aaKnown RBP13.12□□□□□ -0.31
SCFD1-203ENST00000458591 PRAMEF8Q5VWM4 474 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 PRAMEF7Q5VXH5 474 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 SIGIRRQ6IA17 410 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CCDC28AQ8IWP9 274 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR5T3Q8NGG3 340 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 OR5M3Q8NGP4 307 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 SMARCD2Q92925 531 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 TEAD3Q99594 435 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 BEX1Q9HBH7 125 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 TEKT2Q9UIF3 430 aa13.12□□□□□ -0.31
SCFD1-203ENST00000458591 SPEGQ15772 3267 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 A0A0G2JK05 382 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 GXYLT2A0PJZ3 443 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 LINC01553A4QN01 128 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 POM121BA6NF01 834 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 SLC9B1P1A6NJY1 282 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 IMPA2O14732 288 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 TPD52L2O43399 206 aaKnown RBP13.11□□□□□ -0.31
SCFD1-203ENST00000458591 NOS1APO75052 506 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-203ENST00000458591 ADAM11O75078 769 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 ZNF85Q03923 595 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 SGCGQ13326 291 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 BICRALQ6AI39 1079 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 SFXN4Q6P4A7 337 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 SFTPA2Q8IWL1 248 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 IZUMO1Q8IYV9 350 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 PCNPQ8WW12 178 aaKnown RBP13.11□□□□□ -0.31
SCFD1-203ENST00000458591 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 LCN9Q8WX39 176 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 BADQ92934 168 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 CREB3L1Q96BA8 519 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 PHF21AQ96BD5 680 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 MEPEQ9NQ76 525 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-203ENST00000458591 CYSLTR2Q9NS75 346 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 MAT2BQ9NZL9 334 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 CALML5Q9NZT1 146 aa13.11□□□□□ -0.31
SCFD1-203ENST00000458591 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
SCFD1-203ENST00000458591 TRANK1O15050 2925 aa13.1□□□□□ -0.31
SCFD1-203ENST00000458591 CDHR4A6H8M9 788 aa13.1□□□□□ -0.31
SCFD1-203ENST00000458591 GRXCR1A8MXD5 290 aa13.1□□□□□ -0.31
SCFD1-203ENST00000458591 PPP1R3DO95685 299 aa13.1□□□□□ -0.31
SCFD1-203ENST00000458591 HMGN1P05114 100 aa13.1□□□□□ -0.31
SCFD1-203ENST00000458591 ATXN8OSP0DMR3 200 aa13.1□□□□□ -0.31
SCFD1-203ENST00000458591 SAGP10523 405 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms