RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMEM44Q2T9K0 475 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 NDUFAF6Q330K2 333 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 GLYR1Q49A26 553 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 RABL3Q5HYI8 236 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 RPS26P11Q5JNZ5 115 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 REEP3Q6NUK4 255 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 C8orf82Q6P1X6 216 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ARSKQ6UWY0 536 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 EIF3MQ7L2H7 374 aaKnown RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 NET1Q7Z628 596 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 SERPINA11Q86U17 422 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 CALHM3Q86XJ0 350 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 FITM2Q8N6M3 262 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF614Q8N883 585 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 FAM71CQ8NEG0 241 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 OR8J3Q8NGG0 315 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 OR10A6Q8NH74 314 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 NFKBIDQ8NI38 313 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 FAM57AQ8TBR7 257 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 GPR119Q8TDV5 335 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 RELTQ969Z4 430 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ARSGQ96EG1 525 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 SH3YL1Q96HL8 342 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF583Q96ND8 569 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 TIMP4Q99727 224 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 SH3GL1Q99961 368 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ARL8BQ9NVJ2 186 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 TNFRSF10DQ9UBN6 386 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 L3MBTL1Q9Y468 752 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 CHST2Q9Y4C5 530 aa9.11□□□□□ -0.95
ATG4A-206ENST00000457035 ALPK2Q86TB3 2170 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 DOPEY1Q5JWR5 2465 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 TMEM247A6NEH6 219 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 GMFGO60234 142 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ADAM11O75078 769 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 GCM2O75603 506 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 AGFG2O95081 481 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CSTAP01040 98 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 DBIP07108 87 aaKnown RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 LINGO3P0C6S8 592 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 UBL4AP11441 157 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 NID1P14543 1247 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ETS2P15036 469 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ABOP16442 354 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 IL7RP16871 459 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 HK1P19367 917 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CA7P43166 264 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 RBBP4Q09028 425 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 SKP2Q13309 424 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 SCARB2Q14108 478 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 TOMM34Q15785 309 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 HACD2Q6Y1H2 254 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 VRK2Q86Y07 508 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CMIPQ8IY22 773 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 SLC15A3Q8IY34 581 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 PEX5LQ8IYB4 626 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ZZZ3Q8IYH5 903 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CCDC197Q8NCU1 140 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 OR52P1PQ8NH57 321 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 OR5W2Q8NH69 310 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 OR14L1PQ8NHC6 308 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 BBS10Q8TAM1 723 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 POC1BQ8TC44 478 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 BCAS4Q8TDM0 211 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CNOT9Q92600 299 aaKnown RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ABTB1Q969K4 478 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 SARAFQ96BY9 339 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 DTNBP1Q96EV8 351 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 PSMG3-AS1Q96PY0 264 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 NPAS1Q99742 590 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 HOPXQ9BPY8 73 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 UGT2B28Q9BY64 529 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 EXO5Q9H790 373 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 PNPLA3Q9NST1 481 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 MED17Q9NVC6 651 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 RLIMQ9NVW2 624 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CMTM6Q9NX76 183 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 TINAGQ9UJW2 476 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 DKKL1Q9UK85 242 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ACAD8Q9UKU7 415 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 SLC35A3Q9Y2D2 325 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 RPH3AQ9Y2J0 694 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF337Q9Y3M9 751 aa9.1□□□□□ -0.95
ATG4A-206ENST00000457035 GPC6Q9Y625 555 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 USP9YO00507 2555 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-206ENST00000457035 CACNA1DQ01668 2161 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 FREM1Q5H8C1 2179 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 A0A087WZY1 265 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 C15orf38-AP3S2A0A0A6YYH1 394 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 TRGV8A0A0C4DH27 118 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 OR2M5A3KFT3 312 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 C5orf58C9J3I9 102 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 ETV2O00321 342 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-206ENST00000457035 PRRG2O14669 202 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 BCKDKO14874 412 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 LRRTM2O43300 516 aa9.09□□□□□ -0.95
ATG4A-206ENST00000457035 EFNA2O43921 213 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms