RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CLDN15P56746 228 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 SKP2Q13309 424 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 FGFBP1Q14512 234 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 GTDC1Q4AE62 458 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 COX20Q5RI15 118 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 C6orf10Q5SRN2 563 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 LRRC74BQ6ZQY2 392 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 OLIG3Q7RTU3 272 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 DMRTC2Q8IXT2 367 aaPredicted RBP15.63■□□□□ 0.09
USP39-208ENST00000455732 METTL25Q8N6Q8 603 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 C9orf106Q8NAJ2 232 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 RELL2Q8NC24 303 aaPredicted RBP15.63■□□□□ 0.09
USP39-208ENST00000455732 FAM71CQ8NEG0 241 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 PNPT1Q8TCS8 783 aaKnown RBP15.63■□□□□ 0.09
USP39-208ENST00000455732 PMM1Q92871 262 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 SPDL1Q96EA4 605 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 PAIP1Q9H074 479 aaKnown RBP15.63■□□□□ 0.09
USP39-208ENST00000455732 CCDC134Q9H6E4 229 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 CCDC167Q9P0B6 97 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 STOML1Q9UBI4 398 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 DCTN4Q9UJW0 460 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 TRIM33Q9UPN9 1127 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 L3MBTL1Q9Y468 752 aa15.63■□□□□ 0.09
USP39-208ENST00000455732 SPG11Q96JI7 2443 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 A0A096LPI6 279 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 SHISA8B8ZZ34 492 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 ETV2O00321 342 aaPredicted RBP15.62■□□□□ 0.09
USP39-208ENST00000455732 DVL2O14641 736 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 RCBTB2O95199 551 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 H6PDO95479 791 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 IL18BPO95998 194 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 CHRM4P08173 479 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 CAPN3P20807 821 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 ADH6P28332 368 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 ZNF136P52737 540 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 SUCLG1P53597 346 aaKnown RBP15.62■□□□□ 0.09
USP39-208ENST00000455732 MAPK14Q16539 360 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 GPAT3Q53EU6 434 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 LRIF1Q5T3J3 769 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 METTL21CQ5VZV1 264 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 SLC2A7Q6PXP3 512 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 EIF3MQ7L2H7 374 aaKnown RBP15.62■□□□□ 0.09
USP39-208ENST00000455732 GGNQ86UU5 652 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 ANKFN1Q8N957 763 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 OR5W2Q8NH69 310 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 POC1BQ8TC44 478 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 GPR119Q8TDV5 335 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 THOC1Q96FV9 657 aaKnown RBP15.62■□□□□ 0.09
USP39-208ENST00000455732 RNF145Q96MT1 663 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 LAT2Q9GZY6 243 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 SLC38A1Q9H2H9 487 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 THUMPD1Q9NXG2 353 aaKnown RBP15.62■□□□□ 0.09
USP39-208ENST00000455732 SLC35A3Q9Y2D2 325 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 ZNF175Q9Y473 711 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 PCDHB14Q9Y5E9 798 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 GPC6Q9Y625 555 aaPredicted RBP15.62■□□□□ 0.09
USP39-208ENST00000455732 GMEB1Q9Y692 573 aa15.62■□□□□ 0.09
USP39-208ENST00000455732 A0A0G2JND7 137 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 NR5A2O00482 541 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 NTN1O95631 604 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 CTSSP25774 331 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 RNF144AP50876 292 aaPredicted RBP15.61■□□□□ 0.09
USP39-208ENST00000455732 DLX5P56178 289 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 CLDN20P56880 219 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 RAC1P63000 192 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 CHRNEQ04844 493 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 FOXF1Q12946 379 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 CBFBQ13951 182 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 SYPL1Q16563 259 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 NDUFAF6Q330K2 333 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 AGKQ53H12 422 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 SLC25A53Q5H9E4 307 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 CHMP1BQ7LBR1 199 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 GRAMD2AQ8IUY3 354 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 UBQLNLQ8IYU4 475 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 AURKBQ96GD4 344 aaPredicted RBP15.61■□□□□ 0.09
USP39-208ENST00000455732 MRGPRX4Q96LA9 322 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 LURAP1Q96LR2 239 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 NPAS1Q99742 590 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 SFXN3Q9BWM7 321 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 RAD21L1Q9H4I0 556 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 P2RX2Q9UBL9 471 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 CCDC168Q8NDH2 2452 aa15.61■□□□□ 0.09
USP39-208ENST00000455732 TEP1Q99973 2627 aaKnown RBP15.61■□□□□ 0.09
USP39-208ENST00000455732 HEATR5AQ86XA9 2040 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 AGAP5A6NIR3 686 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 H0YC42 278 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 SEC14L5O43304 696 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 NUDT14O95848 222 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 CSTAP01040 98 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 TMIGD3P0DMS9 266 aaPredicted RBP15.6■□□□□ 0.09
USP39-208ENST00000455732 TROVE2P10155 538 aaKnown RBP eCLIP15.6■□□□□ 0.09
USP39-208ENST00000455732 BMP2P12643 396 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 ETFAP13804 333 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 PRKCAP17252 672 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 BMP5P22003 454 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 RPS4Y1P22090 263 aaKnown RBP15.6■□□□□ 0.09
USP39-208ENST00000455732 OPRM1P35372 400 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 PGM1P36871 562 aa15.6■□□□□ 0.09
USP39-208ENST00000455732 TPD52P55327 224 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms