RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MIXL1Q9H2W2 232 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 UCK1Q9HA47 277 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 ABCB9Q9NP78 766 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 MEPEQ9NQ76 525 aaPredicted RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 BAIAP2Q9UQB8 552 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 POLHQ9Y253 713 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 MRPS33Q9Y291 106 aaKnown RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 PCDHGB2Q9Y5G2 931 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 A0A1W2PQL4 384 aaPredicted RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 SLC9B1P1A6NJY1 282 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 FAM183AA6NL82 134 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 H3BQ06 376 aaPredicted RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 HCN1O60741 890 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 CTSBP07858 339 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 ACAA2P42765 397 aaKnown RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 FASLGP48023 281 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 FOXK2Q01167 660 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 FZD5Q13467 585 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 FAM53BQ14153 422 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 DEFB110Q30KQ9 67 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 PDZK1Q5T2W1 519 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 XKRXQ6PP77 449 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 DNAJA4Q8WW22 397 aaPredicted RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 VSTM2LQ96N03 204 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 MIR1-1HGQ9H1L0 117 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 INPP5EQ9NRR6 644 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 INIPQ9NRY2 104 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 C14orf119Q9NWQ9 140 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 TBC1D24Q9ULP9 559 aa13.93□□□□□ -0.18
LDLR-202ENST00000455727 NDRG2Q9UN36 371 aaKnown RBP13.93□□□□□ -0.18
LDLR-202ENST00000455727 A0A0A6YYC8 382 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 B4DGG1 531 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 I3L1I5 382 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 FOXS1O43638 330 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 FUT1P19526 365 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 CELP19835 753 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 PTNP21246 168 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 STX4Q12846 297 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 ZNF141Q15928 474 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 OR51G2Q8NGK0 314 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 KIAA1143Q96AT1 154 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 ZNF578Q96N58 590 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 RERGLQ9H628 205 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 DNAJB12Q9NXW2 375 aaKnown RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 FLRT3Q9NZU0 649 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 SLC35A3Q9Y2D2 325 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 MTCH2Q9Y6C9 303 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 A0A1B0GWA3 101 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 SLC22A31A6NKX4 558 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 CHURC1-FNTBB4DL54 471 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 SAGP10523 405 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 ZNF791Q3KP31 576 aaPredicted RBP13.92□□□□□ -0.18
LDLR-202ENST00000455727 LINC00114Q6XXX2 140 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 THSD4Q6ZMP0 1018 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 ZFP41Q8N8Y5 198 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 GDPD1Q8N9F7 314 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 SYT14Q8NB59 555 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 OR13C2Q8NGS9 318 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 PTP4A1Q93096 173 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 ZNF285Q96NJ3 590 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 IFT27Q9BW83 186 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 ZNF576Q9H609 170 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 CACNA1IQ9P0X4 2223 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 DNAH14Q0VDD8 3507 aa13.92□□□□□ -0.18
LDLR-202ENST00000455727 C12orf71A8MTZ7 269 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 PRR23D1E9PI22 279 aaPredicted RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 NPIPB9F8W1W9 429 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 TGFBR3LH3BV60 316 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CLDN4O14493 209 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 LRRTM2O43300 516 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 SEC14L5O43304 696 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 HRO43593 1189 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 NSA2O95478 260 aaKnown RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 IGKV1D-16P01601 117 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 PRR23D2P0DMB1 279 aaPredicted RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 ELOCQ15369 112 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 RTL4Q6ZR62 310 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CMIPQ8IY22 773 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 SLC37A3Q8NCC5 494 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 OR6C4Q8NGE1 309 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 KISS1RQ969F8 398 aaPredicted RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 OTULINQ96BN8 352 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 G6PC3Q9BUM1 346 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 BABAM2Q9NXR7 383 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 FABP12A6NFH5 140 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 TTC36A6NLP5 189 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 GABRPO00591 440 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CASKO14936 926 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 PRAMEF2O60811 474 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 ZNF217O75362 1048 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 RFPL3O75679 317 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CSF2P04141 144 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CHRNB1P11230 501 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 IL7P13232 177 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CFL1P23528 166 aaKnown RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 CAPZBP47756 277 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 PSMD4P55036 377 aaKnown RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 PPP3R1P63098 170 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms