RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 APEX1P27695 318 aaKnown RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 FOXL2P58012 376 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ENPP2Q13822 863 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 DOC2BQ14184 412 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 TP53I3Q53FA7 332 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 HLA-DQA1Q5Y7H0 255 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 PHF21AQ96BD5 680 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 LMAN1LQ9HAT1 526 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SIDT1Q9NXL6 827 aaKnown RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 GRIP1Q9Y3R0 1128 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 MYO15AQ9UKN7 3530 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 REV3LO60673 3130 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 A0A0J9YY10 115 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ERGP11308 486 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ACVR2AP27037 513 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SLC1A3P43003 542 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SCN1BQ07699 218 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 FCRL6Q6DN72 434 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF425Q6IV72 752 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 C1orf94Q6P1W5 598 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 GJD3Q8N144 294 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF619Q8N2I2 560 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 C2orf42Q9NWW7 574 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 KLK4Q9Y5K2 254 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 OBSL1O75147 1896 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 CSNK1EP49674 416 aaKnown RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 E2F2Q14209 437 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 RTL4Q6ZR62 310 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SLC44A3Q8N4M1 653 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ACBD7Q8N6N7 88 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 CDRT4Q8N9R6 151 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SFXN5Q8TD22 340 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SRA1Q9HD15 236 aaKnown RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 FBXO8Q9NRD0 319 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 KCND3Q9UK17 655 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 SDK2Q58EX2 2172 aa11.12□□□□□ -0.63
SMPD4-213ENST00000454468 RP1L1Q8IWN7 2480 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-213ENST00000454468 TSPAN9O75954 239 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 PSMB10P40306 273 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 GFERP55789 205 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 SNRPGP62308 76 aaKnown RBP11.11□□□□□ -0.63
SMPD4-213ENST00000454468 RPL6Q02878 288 aaKnown RBP11.11□□□□□ -0.63
SMPD4-213ENST00000454468 CRMP1Q14194 572 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 OR5M10Q6IEU7 315 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 RAB43Q86YS6 212 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 LINC00471Q8N535 108 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 OR8K3Q8NH51 312 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 TM9SF4Q92544 642 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 HS6ST2Q96MM7 605 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 SIAEQ9HAT2 523 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 Q9N2J8 555 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 IKZF2Q9UKS7 526 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 PCDHGA3Q9Y5H0 932 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 PRAMEF26H0Y7S4 382 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 APBB3O95704 486 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 DBIP07108 87 aaKnown RBP11.11□□□□□ -0.63
SMPD4-213ENST00000454468 MAKP20794 623 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 RABIFP47224 123 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-213ENST00000454468 FABP5Q01469 135 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 RHAGQ02094 409 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 HYAL4Q2M3T9 481 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 MRM1Q6IN84 353 aaKnown RBP11.11□□□□□ -0.63
SMPD4-213ENST00000454468 TMEM99Q8N816 258 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 ORAI1Q96D31 301 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF681Q96N22 645 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 ALG8Q9BVK2 526 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 GNG8Q9UK08 70 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 IER3IP1Q9Y5U9 82 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 C11orf98E9PRG8 122 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 DVL2O14641 736 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 RCBTB2O95199 551 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 AGR2O95994 175 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 BLKP51451 505 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 BAK1Q16611 211 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 WDR45BQ5MNZ6 344 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 ZNF517Q6ZMY9 492 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-213ENST00000454468 DGAT2L6Q6ZPD8 337 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 GDPD3Q7L5L3 318 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 CEACAM19Q7Z692 300 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 LRRC17Q8N6Y2 441 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 SAMD12Q8N8I0 201 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 MORN4Q8NDC4 146 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 DPYSL5Q9BPU6 564 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 BCL7BQ9BQE9 202 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 BCL2L10Q9HD36 194 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 LRIT1Q9P2V4 623 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 CES1P1Q9UKY3 287 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 ADAM18Q9Y3Q7 739 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 SLC22A7Q9Y694 548 aa11.11□□□□□ -0.63
SMPD4-213ENST00000454468 HELZP42694 1942 aaKnown RBP11.1□□□□□ -0.63
SMPD4-213ENST00000454468 LRRK1Q38SD2 2015 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms