RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 LILRA2Q8N149 483 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 CLEC4FQ8N1N0 589 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 OIT3Q8WWZ8 545 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 GMPPAQ96IJ6 420 aaPredicted RBP17.38■□□□□ 0.37
USP40-207ENST00000450940 SLC35G5Q96KT7 338 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 SLC39A3Q9BRY0 314 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 PLEKHF2Q9H8W4 249 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 GLRX2Q9NS18 164 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 AIG1Q9NVV5 245 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 KCNE5Q9UJ90 142 aa17.38■□□□□ 0.37
USP40-207ENST00000450940 GPC6Q9Y625 555 aaPredicted RBP17.38■□□□□ 0.37
USP40-207ENST00000450940 PRRC2AP48634 2157 aaKnown RBP17.38■□□□□ 0.37
USP40-207ENST00000450940 E9PBE3 544 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 GTPBP1O00178 669 aaKnown RBP17.37■□□□□ 0.37
USP40-207ENST00000450940 ZNF264O43296 627 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 CXCL13O43927 109 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 FCMRO60667 390 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 SS18L1O75177 396 aaPredicted RBP17.37■□□□□ 0.37
USP40-207ENST00000450940 ERLIN1O75477 346 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 ME2P23368 584 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 CPOXP36551 454 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 FOXF1Q12946 379 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 PDSS1Q5T2R2 415 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 SAXO2Q658L1 398 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 ANKRD46Q86W74 232 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 ZNF610Q8N9Z0 462 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 TOR1AIP2Q8NFQ8 470 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 OR5W2Q8NH69 310 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 ZNF524Q96C55 264 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 NEURL3Q96EH8 262 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 TEX37Q96LM6 180 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 KLHL15Q96M94 604 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 CCDC115Q96NT0 180 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 ZNF350Q9GZX5 532 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 SAP130Q9H0E3 1048 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 OR51I1Q9H343 314 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 TMBIM4Q9HC24 238 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 CCM2LQ9NUG4 571 aaPredicted RBP17.37■□□□□ 0.37
USP40-207ENST00000450940 EXD2Q9NVH0 621 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 BTNL2Q9UIR0 455 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 MCTS1Q9ULC4 181 aaKnown RBP17.37■□□□□ 0.37
USP40-207ENST00000450940 GPR45Q9Y5Y3 372 aa17.37■□□□□ 0.37
USP40-207ENST00000450940 SERINC4A6NH21 518 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 TRPC5OSA6NMA1 111 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 ZNF195O14628 629 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 TNFSF11O14788 317 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 OPN1LWP04000 364 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 PRKCAP17252 672 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 S100A3P33764 101 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 UGT2B10P36537 528 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 MAGOHP61326 146 aaKnown RBP17.36■□□□□ 0.37
USP40-207ENST00000450940 UFM1P61960 85 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 TOMM34Q15785 309 aaPredicted RBP17.36■□□□□ 0.37
USP40-207ENST00000450940 FAM174BQ3ZCQ3 159 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 PDZK1Q5T2W1 519 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 HBMQ6B0K9 141 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 OR6K3Q8NGY3 331 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 FBXO27Q8NI29 283 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 OSTF1Q92882 214 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 MBD6Q96DN6 1003 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 MRGPRX4Q96LA9 322 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 WFIKKN1Q96NZ8 548 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 PRRG4Q9BZD6 226 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 LAT2Q9GZY6 243 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 TMEM185BQ9H7F4 350 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 POLE3Q9NRF9 147 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 PROCRQ9UNN8 238 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 EMC9Q9Y3B6 208 aa17.36■□□□□ 0.37
USP40-207ENST00000450940 SLCO1B7G3V0H7 640 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 UGT2B17O75795 530 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 SYNGR4O95473 234 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 CPSF4O95639 269 aaKnown RBP17.35■□□□□ 0.37
USP40-207ENST00000450940 NUDT14O95848 222 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 UBL4AP11441 157 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 SHC1P29353 583 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 IL12AP29459 219 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 CCKARP32238 428 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 RNF144AP50876 292 aaPredicted RBP17.35■□□□□ 0.37
USP40-207ENST00000450940 CARD18P57730 90 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 SKP2Q13309 424 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 GPR68Q15743 365 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 NDUFAF6Q330K2 333 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 ATG16L1Q676U5 607 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 PAMR1Q6UXH9 720 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 MAELQ96JY0 434 aaKnown RBP17.35■□□□□ 0.37
USP40-207ENST00000450940 WDR55Q9H6Y2 383 aaPredicted RBP17.35■□□□□ 0.37
USP40-207ENST00000450940 MKLN1Q9UL63 735 aa17.35■□□□□ 0.37
USP40-207ENST00000450940 A0A1W2PPR1 153 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 C16orf97H3BN30 126 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 CASKO14936 926 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 KIAA0513O60268 411 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 OR12D1P0DN82 309 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 POU2F1P14859 743 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 DNASE1P24855 282 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 EPHA3P29320 983 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 LRRC74AQ0VAA2 488 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 FUT5Q11128 374 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 C16orf62Q7Z3J2 963 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 MGARPQ8TDB4 240 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 XAGE5Q8WWM1 108 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms