RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TIGARQ9NQ88 270 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 KLHL28Q9NXS3 571 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 ZNF226Q9NYT6 803 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 ICAM5Q9UMF0 924 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 CLEC4AQ9UMR7 237 aa13.7□□□□□ -0.22
CHD3-205ENST00000449744 GPC6Q9Y625 555 aaPredicted RBP13.7□□□□□ -0.22
CHD3-205ENST00000449744 NUP214P35658 2090 aaPredicted RBP13.7□□□□□ -0.22
CHD3-205ENST00000449744 CSMD2Q7Z408 3487 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 A0A0J9YW62 118 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 E9PBE3 544 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 NPIPB9F8W1W9 429 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 C16orf97H3BN30 126 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 ZNF195O14628 629 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 ZNF264O43296 627 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 OIP5O43482 229 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 EIF4E2O60573 245 aaKnown RBP13.69□□□□□ -0.22
CHD3-205ENST00000449744 CYP7B1O75881 506 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 AGR2O95994 175 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 CGAP01215 116 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 RAF1P04049 648 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 HRGP04196 525 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 UBL4AP11441 157 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 S100A3P33764 101 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 SFTPDP35247 375 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 CARD18P57730 90 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 NDUFAF6Q330K2 333 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 ARHGAP11BQ3KRB8 267 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 SPANXN4Q5MJ08 99 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 PDZK1Q5T2W1 519 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 ATG16L1Q676U5 607 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 OGFOD2Q6N063 350 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 OR6K3Q8NGY3 331 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 MED18Q9BUE0 208 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 NMUR2Q9GZQ4 415 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 OR51I1Q9H343 314 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 SERHL2Q9H4I8 314 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 FANCFQ9NPI8 374 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 THAP1Q9NVV9 213 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 NKIRAS1Q9NYS0 192 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 TESMINQ9Y4I5 508 aa13.69□□□□□ -0.22
CHD3-205ENST00000449744 TACC2O95359 2948 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 SERINC4A6NH21 518 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 SS18L1O75177 396 aaPredicted RBP13.68□□□□□ -0.22
CHD3-205ENST00000449744 PABPC4LP0CB38 370 aaKnown RBP13.68□□□□□ -0.22
CHD3-205ENST00000449744 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 IL11P20809 199 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 CHI3L1P36222 383 aaPredicted RBP13.68□□□□□ -0.22
CHD3-205ENST00000449744 UGT2B10P36537 528 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 CASP9P55211 416 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 NME5P56597 212 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 WDR4P57081 412 aaKnown RBP13.68□□□□□ -0.22
CHD3-205ENST00000449744 CBFBQ13951 182 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 GUSBP1Q15486 140 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 EXOC3L2Q2M3D2 409 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 FAM174BQ3ZCQ3 159 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 SPATA19Q7Z5L4 167 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 ATP6V1C2Q8NEY4 427 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 OR5W2Q8NH69 310 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 MIPOL1Q8TD10 442 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 GPR119Q8TDV5 335 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 XAGE5Q8WWM1 108 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 CPNE4Q96A23 557 aaPredicted RBP13.68□□□□□ -0.22
CHD3-205ENST00000449744 ARL8AQ96BM9 186 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 MRGPRX4Q96LA9 322 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 PLSCR4Q9NRQ2 329 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 MARCOQ9UEW3 520 aaPredicted RBP13.68□□□□□ -0.22
CHD3-205ENST00000449744 MKLN1Q9UL63 735 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
CHD3-205ENST00000449744 SLCO1B7G3V0H7 640 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 SDHDO14521 159 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 HDAC3O15379 428 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 FCMRO60667 390 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 SCN2BO60939 215 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 CSTAP01040 98 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 KITP10721 976 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 PRKCAP17252 672 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 KHKP50053 298 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
CHD3-205ENST00000449744 PHC1P78364 1004 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 HPCAP84074 193 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 SELENBP1Q13228 472 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 CASP8Q14790 479 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 QPRTQ15274 297 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 TOMM34Q15785 309 aaPredicted RBP13.67□□□□□ -0.22
CHD3-205ENST00000449744 ZNF141Q15928 474 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 TMEM176BQ3YBM2 270 aaPredicted RBP13.67□□□□□ -0.22
CHD3-205ENST00000449744 TNFAIP8L2Q6P589 184 aaPredicted RBP13.67□□□□□ -0.22
CHD3-205ENST00000449744 STK32CQ86UX6 486 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 TRIML2Q8N7C3 387 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 ROBO4Q8WZ75 1007 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 RAB8BQ92930 207 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 ARSGQ96EG1 525 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 ZC3HAV1LQ96H79 300 aaKnown RBP13.67□□□□□ -0.22
CHD3-205ENST00000449744 ZBTB18Q99592 522 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 SLC35A5Q9BS91 424 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms