RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
USP39-206ENST00000448971 P2RX2Q9UBL9 471 aa13.16□□□□□ -0.3
USP39-206ENST00000448971 A0A087WZY1 265 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 CENPVL1A0A0U1RR11 272 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 SERINC4A6NH21 518 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 KDM4EB2RXH2 506 aaPredicted RBP13.15□□□□□ -0.3
USP39-206ENST00000448971 NPIPB9F8W1W9 429 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 LINC01387J3KSC0 135 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 UGT2B17O75795 530 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 H6PDO95479 791 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 EPPINO95925 133 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 CSTAP01040 98 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 IL2RAP01589 272 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 ZCCHC18P0CG32 403 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 NR2F1P10589 423 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 PEPDP12955 493 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 CPN1P15169 458 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 ADH7P40394 386 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 P2RX1P51575 399 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 CLDN18P56856 261 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 DSTNP60981 165 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 FOXF1Q12946 379 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 ZNF141Q15928 474 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 SYPL1Q16563 259 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 PLPPR5Q32ZL2 321 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 RIPPLY2Q5TAB7 128 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 NSUN5P2Q63ZY6 315 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 CBLN3Q6UW01 205 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 FRRS1Q6ZNA5 592 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 HMGN2P46Q86SG4 172 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 FUNDC1Q8IVP5 155 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 ANKFN1Q8N957 763 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 TOR1AIP2Q8NFQ8 470 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 GTF2H4Q92759 462 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 TUBA1CQ9BQE3 449 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 RAD21L1Q9H4I0 556 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 Q9UFV3 132 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 LIPT1Q9Y234 373 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 L3MBTL1Q9Y468 752 aa13.15□□□□□ -0.3
USP39-206ENST00000448971 A0A096LPI6 279 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 CLCA1A8K7I4 914 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 HSPB2A8KAH6 182 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 ANGPT2O15123 496 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 ZNF264O43296 627 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 OIP5O43482 229 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 BCHEP06276 602 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 CHRM4P08173 479 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 UBTFL6P0CB48 400 aaPredicted RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 ETFAP13804 333 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 DNAJA1P31689 397 aaKnown RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 ARFIP2P53365 341 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 CBFBQ13951 182 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 HSPB2Q16082 182 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 GLYR1Q49A26 553 aaPredicted RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 PPP4R4Q6NUP7 873 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 SEM1Q6ZVN7 128 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 P4HA3Q7Z4N8 544 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 GRAMD2AQ8IUY3 354 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 TNIP2Q8NFZ5 429 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 ZPLD1Q8TCW7 415 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 NRGNQ92686 78 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 RNF145Q96MT1 663 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 TRNT1Q96Q11 434 aaKnown RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 PAIP1Q9H074 479 aaKnown RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 QRSL1Q9H0R6 528 aaKnown RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 CCDC134Q9H6E4 229 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
USP39-206ENST00000448971 KCNJ16Q9NPI9 418 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 TMEM45AQ9NWC5 275 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 STOML1Q9UBI4 398 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 KCNE5Q9UJ90 142 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 ZNF337Q9Y3M9 751 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 PCDHB14Q9Y5E9 798 aa13.14□□□□□ -0.31
USP39-206ENST00000448971 MPDZO75970 2070 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 PRAMEF27A3QJZ7 478 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 FAM221AA4D161 298 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 MBD3L4A6NDZ8 208 aaPredicted RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 MBD3L3A6NE82 208 aaPredicted RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 MBD3L5A6NJ08 208 aaPredicted RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 CD99P14209 185 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 ME2P23368 584 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 MDH1P40925 334 aaKnown RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 MAGEA8P43361 318 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 IST1P53990 364 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 CRISP3P54108 245 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 EEFSECP57772 596 aaKnown RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 RPS3AP61247 264 aaKnown RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 CHRNEQ04844 493 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 SKP2Q13309 424 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 CGB2Q6NT52 195 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 LRRC74BQ6ZQY2 392 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 GTPBP8Q8N3Z3 284 aaPredicted RBP13.13□□□□□ -0.31
USP39-206ENST00000448971 NAXEQ8NCW5 288 aa13.13□□□□□ -0.31
USP39-206ENST00000448971 MBD3L2Q8NHZ7 208 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms