RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CCT3P49368 545 aaKnown RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 RAC3P60763 192 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 PDE7AQ13946 482 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 TAB1Q15750 504 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 CCNJQ5T5M9 372 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 HMBOX1Q6NT76 420 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 BHLHB9Q6PI77 547 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 TFAP2EQ6VUC0 442 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 RNF165Q6ZSG1 346 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 Q6ZT83 130 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 BHLHA15Q7RTS1 189 aaPredicted RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 NUFIP2Q7Z417 695 aaKnown RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 P2RY8Q86VZ1 359 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 TDRPQ86YL5 185 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 DDIASQ8IXT1 998 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 BANPQ8N9N5 519 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 PIWIL2Q8TC59 973 aaKnown RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 OR5P2Q8WZ92 322 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 MRGPRX4Q96LA9 322 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 NPAS1Q99742 590 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 RHNO1Q9BSD3 238 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 ACTRT3Q9BYD9 372 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 POTEKPQ9BYX7 375 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 CISD1Q9NZ45 108 aaKnown RBP11.82□□□□□ -0.52
HMGB3-204ENST00000448905 ADAM21Q9UKJ8 722 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 FIS1Q9Y3D6 152 aa11.82□□□□□ -0.52
HMGB3-204ENST00000448905 MED12LQ86YW9 2145 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 EIF4E2O60573 245 aaKnown RBP11.81□□□□□ -0.52
HMGB3-204ENST00000448905 TRIM13O60858 407 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 SOD3P08294 240 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 FGF4P08620 206 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 DANCRP0C864 163 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 BCKDHAP12694 445 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ENPP1P22413 925 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ATP12AP54707 1039 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 RPL38P63173 70 aaKnown RBP11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF117Q03924 483 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 FOXF1Q12946 379 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 CBFBQ13951 182 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 LASP1Q14847 261 aaKnown RBP11.81□□□□□ -0.52
HMGB3-204ENST00000448905 TSC22D1Q15714 1073 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 CD226Q15762 336 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 GALNTL6Q49A17 601 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 CDC73Q6P1J9 531 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ZAR1Q86SH2 424 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF619Q8N2I2 560 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 OR56A1Q8NGH5 318 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 CLHC1Q8NHS4 586 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 GPR119Q8TDV5 335 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 MZB1Q8WU39 189 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 CDS1Q92903 461 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 FAM120BQ96EK7 910 aaKnown RBP11.81□□□□□ -0.52
HMGB3-204ENST00000448905 FCRL1Q96LA6 429 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 PPP3R2Q96LZ3 170 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ADAD1Q96M93 576 aaKnown RBP11.81□□□□□ -0.52
HMGB3-204ENST00000448905 GRIP2Q9C0E4 1043 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 SLCO5A1Q9H2Y9 848 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ATP6V1HQ9UI12 483 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 ICAM5Q9UMF0 924 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 DTNAQ9Y4J8 743 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 TRAF6Q9Y4K3 522 aa11.81□□□□□ -0.52
HMGB3-204ENST00000448905 DUXAA6NLW8 204 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 LSM1O15116 133 aaKnown RBP11.8□□□□□ -0.52
HMGB3-204ENST00000448905 EFNA2O43921 213 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 LYPLA1O75608 230 aaPredicted RBP11.8□□□□□ -0.52
HMGB3-204ENST00000448905 NTN1O95631 604 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 NID1P14543 1247 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 KRT4P19013 534 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 ACVR1BP36896 505 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 CDKN1AP38936 164 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 DSCR9P59020 149 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 BSPH1Q075Z2 132 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF844Q08AG5 666 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 RASGEF1BQ0VAM2 473 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 FAPQ12884 760 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 SELENBP1Q13228 472 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 PPA1Q15181 289 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 STK11Q15831 433 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 NRF1Q16656 503 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF385BQ569K4 471 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 DCST2Q5T1A1 773 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 AGAP6Q5VW22 663 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 HIPK1Q86Z02 1210 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF100Q8IYN0 542 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 DEPDC4Q8N2C3 294 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 ZNF614Q8N883 585 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 OR5W2Q8NH69 310 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 RFWD2Q8NHY2 731 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 ZFP90Q8TF47 636 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 MOAP1Q96BY2 351 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 OTUB1Q96FW1 271 aaPredicted RBP11.8□□□□□ -0.52
HMGB3-204ENST00000448905 SRXN1Q9BYN0 137 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 BCO1Q9HAY6 547 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 TNFRSF12AQ9NP84 129 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 DNAJC15Q9Y5T4 150 aa11.8□□□□□ -0.52
HMGB3-204ENST00000448905 MAGED1Q9Y5V3 778 aaPredicted RBP11.8□□□□□ -0.52
HMGB3-204ENST00000448905 HEATR5AQ86XA9 2040 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms